CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm010460
(
Prunus mume
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pm010460
T264252_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm010460
mTERF
25
194
SSSSTASNSQALNTSTNAQLAAKPKTLLQKHPLYTPTHTKLSLQFKEKILCLEIMGVDAGKALSQNPSLHTASLHSIHSIISFLQSKGIHQKDLPKIFGMCPNILTSSIKSDLNPVFIFLSEDLKVPEHSFRKVINKCPRLLACSVIDQLKPALFYLQRLGFKDLDALAY
Pm010460
mTERF
192
305
LAYHDSVLLVSSVEKTLIPKLEFLQSLGFPRDEAVGMVLRCPGLLTFSIENNFKPKFEYFSADMGKKLEELKQFPQYFAFSLEKRIKPRHMEVVQRGVEVPLPLMLKSTDDEFR
Links
Other
mTERF
family TFs
Other
Prunus mume
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_022_00242
Aquilegia coerulea
Aquca_022_00242
N
0.728
evm.TU.supercontig_139.30
Carica papaya
evm.TU.supercontig_139.30
N
0.741
Ca_22558
Cicer arietinum
Ca_22558
N
0.746
Cla019852
Citrullus lanatus
Cla019852
N
0.815
Ciclev10016031m.g
Citrus clementina
Ciclev10016031m.g
N
0.767
orange1.1g035716m.g
Citrus sinensis
orange1.1g035716m.g
N
0.767
Cucsa.152130
Cucumis sativus
Cucsa.152130
N
0.763
gene30384-v1.0-hybrid
Fragaria vesca
gene30384-v1.0-hybrid
N
0.776
GLYMA09G11740
Glycine max
GLYMA09G11740
N
0.707
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
0.710
chr6.CM0037.1460.nc
Lotus japonicus
chr6.CM0037.1460.nc
N
0.711
MDP0000233286
Malus domestica
MDP0000233286
N
0.815
MTR_2g049780
Medicago truncatula
MTR_2g049780
N
0.767
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.737
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
0.983
29599.m000171
Ricinus communis
29599.m000171
N
0.767
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.724
TCM_029419
Theobroma cacao
TCM_029419
N
0.724
VIT_10s0003g04040
Vitis vinifera
VIT_10s0003g04040
N
0.754