CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1681s0059
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.1681s0059
T264625_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1681s0059.1.p
mTERF
26
123
STSKPLYLKFQTSQRENLRHLSSLGIVPQNPRLAPPANDLPVILSAVDFLKSKGISDDDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEES
Cagra.1681s0059.1.p
mTERF
108
272
VFDFLTGELGASAEESRGLIVNCPNILLSDVEYCLRPTLVYLKELGIRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHQEAARVCGRIPAIFGYSVEDNLRPKYEFLVYDMERELEELKKFPQYFGFSLGKRIKPRHWHLKKKNVEVSLSRMLMWGDQKFY
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD05
Arabidopsis lyrata
fgenesh2_kg.5__1020__AT3G46580.1
N
MBD5
Arabidopsis thaliana
AT3G46580
N
Bostr.18473s0301
Boechera stricta
Bostr.18473s0301
N
Bo1g070790
Brassica oleracea
Bo1g070790
N
Bo9g139330
Brassica oleracea
Bo9g139330
N
Cagra.0448s0007
Capsella grandiflora
Cagra.0448s0007
N
Carubv10018084m.g
Capsella rubella
Carubv10018084m.g
N
Thhalv10002683m.g
Eutrema salsugineum
Thhalv10002683m.g
N
Thhalv10014530m.g
Eutrema salsugineum
Thhalv10014530m.g
N