CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10024740m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10024740m.g
T265225_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10024739m
mTERF
117
257
RFISNLLSKIDDNHKDISRALTKYLRYNPINEFEPFFESLGLCPSEFEPLLPQQPMFLSDDGIMFENFHALCNYGIPRGKIGRVYKEAREVFRYESGMLESKLRAYEDLGLRKATVIKLVTSCPLLLVGGIDGEFACVVDK
Thhalv10024739m
mTERF
287
514
IEFLEKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKLGLQVNEIYRLFIDNPEMLSDKCVKNIRKTLDFLVAIRMETQFIRKTLLSHMELIGTCSLQAPRTACNSLNVSQDELCQILKEDPLRLFTLVSTTTNRKSKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLT
Thhalv10024739m
mTERF
428
572
SKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLTELLGYPIESLVSFPAYLCYDMQRIHHRFSMYLWLRERDAAKPLLSPSTILTCGDARFV
Thhalv10024740m
mTERF
117
257
RFISNLLSKIDDNHKDISRALTKYLRYNPINEFEPFFESLGLCPSEFEPLLPQQPMFLSDDGIMFENFHALCNYGIPRGKIGRVYKEAREVFRYESGMLESKLRAYEDLGLRKATVIKLVTSCPLLLVGGIDGEFACVVDK
Thhalv10024740m
mTERF
287
514
IEFLEKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKLGLQVNEIYRLFIDNPEMLSDKCVKNIRKTLDFLVAIRMETQFIRKTLLSHMELIGTCSLQAPRTACNSLNVSQDELCQILKEDPLRLFTLVSTTTNRKSKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLT
Thhalv10024740m
mTERF
428
572
SKLLSEDSRKYAEKTAFLLRLGYVENSDEMVKALKRFRGRGDQLQERFDCLVKAGLNHNVVTEMIKHAPMILNLSKDVIEKKIHSLTELLGYPIESLVSFPAYLCYDMQRIHHRFSMYLWLRERDAAKPLLSPSTILTCGDARFV
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_702442.1
Arabidopsis lyrata
scaffold_702442.1
N
0.859
AT4G19650
Arabidopsis thaliana
AT4G19650
N
0.859
Bostr.30275s0443
Boechera stricta
Bostr.30275s0443
N
0.839
Bo1g021780
Brassica oleracea
Bo1g021780
N
0.702
Bra013414
Brassica rapa
Bra013414
N
0.762
Cagra.3262s0017
Capsella grandiflora
Cagra.3262s0017
N
0.846
Carubv10004425m.g
Capsella rubella
Carubv10004425m.g
N
0.798