CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ETC1
(
Arabidopsis lyrata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Al_scaffold_0001_92
T266100_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0001_92
Myb
33
75
AMAQEEEDLICRMYKLVGERWDLIAGRIPGRTAEEIERFWVMK
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis lyrata
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00147p00088570
Amborella trichopoda
AMTR_s00147p00088570
N
0.727
Aquca_012_00145
Aquilegia coerulea
Aquca_012_00145
N
0.664
ETC3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002892
N
0.682
ETC1
Arabidopsis thaliana
AT1G01380
N
0.909
ETC3
Arabidopsis thaliana
AT4G01060
N
0.699
Bostr.5325s0057
Boechera stricta
Bostr.5325s0057
N
0.909
Bostr.7365s0058
Boechera stricta
Bostr.7365s0058
N
0.746
Bo2g098940
Brassica oleracea
Bo2g098940
N
0.705
Bo3g022870
Brassica oleracea
Bo3g022870
N
0.662
Bo3g054440
Brassica oleracea
Bo3g054440
N
0.678
Bo8g117860
Brassica oleracea
Bo8g117860
N
0.828
Bo9g003750
Brassica oleracea
Bo9g003750
N
0.692
Bra000941
Brassica rapa
Bra000941
N
0.678
Bra008539
Brassica rapa
Bra008539
N
0.705
Bra026297
Brassica rapa
Bra026297
N
0.683
Bra032635
Brassica rapa
Bra032635
N
0.828
Bra037388
Brassica rapa
Bra037388
N
0.692
PK11198.1
Cannabis sativa
PK11198.1
N
0.712
Cagra.1372s0017
Capsella grandiflora
Cagra.1372s0017
N
0.746
Cagra.1968s0081
Capsella grandiflora
Cagra.1968s0081
N
0.909
Carubv10003403m.g
Capsella rubella
Carubv10003403m.g
N
0.746
Carubv10011382m.g
Capsella rubella
Carubv10011382m.g
N
0.909
evm.TU.contig_29502
Carica papaya
evm.TU.contig_29502
N
0.792
evm.TU.supercontig_3.55
Carica papaya
evm.TU.supercontig_3.55
N
0.668
Ca_15029
Cicer arietinum
Ca_15029
N
0.703
Ciclev10006315m.g
Citrus clementina
Ciclev10006315m.g
N
0.702
Ciclev10024111m.g
Citrus clementina
Ciclev10024111m.g
N
0.703
orange1.1g034546m.g
Citrus sinensis
orange1.1g034546m.g
N
0.703
Eucgr.A01720
Eucalyptus grandis
Eucgr.A01720
N
0.686
Eucgr.D01323
Eucalyptus grandis
Eucgr.D01323
N
0.686
Eucgr.E00069
Eucalyptus grandis
Eucgr.E00069
N
0.703
Eucgr.E00851
Eucalyptus grandis
Eucgr.E00851
N
0.672
Eucgr.K00332
Eucalyptus grandis
Eucgr.K00332
N
0.735
Thhalv10009233m.g
Eutrema salsugineum
Thhalv10009233m.g
N
0.833
Thhalv10029104m.g
Eutrema salsugineum
Thhalv10029104m.g
N
0.724
gene19217-v1.0-hybrid
Fragaria vesca
gene19217-v1.0-hybrid
N
0.700
gene23919-v1.0-hybrid
Fragaria vesca
gene23919-v1.0-hybrid
N
0.680
gene35171-v1.0-hybrid
Fragaria vesca
gene35171-v1.0-hybrid
N
0.746
GLYMA01G43435
Glycine max
GLYMA01G43435
N
0.688
GLYMA06G45941
Glycine max
GLYMA06G45941
N
0.661
GLYMA11G02061
Glycine max
GLYMA11G02061
N
0.676
GLYMA12G10790
Glycine max
GLYMA12G10790
N
0.661
GLYMA12G32130
Glycine max
GLYMA12G32130
N
0.704
Gorai.001G155700
Gossypium raimondii
Gorai.001G155700
N
0.668
Gorai.002G083400
Gossypium raimondii
Gorai.002G083400
N
0.674
Gorai.007G107400
Gossypium raimondii
Gorai.007G107400
N
0.703
Gorai.010G253000
Gossypium raimondii
Gorai.010G253000
N
0.682
Lus10005949.g
Linum usitatissimum
Lus10005949.g
N
0.695
Lus10014933.g
Linum usitatissimum
Lus10014933.g
N
0.674
Lus10038822.g
Linum usitatissimum
Lus10038822.g
N
0.724
MDP0000141474
Malus domestica
MDP0000141474
N
0.709
MDP0000216918
Malus domestica
MDP0000216918
N
0.680
MDP0000270078
Malus domestica
MDP0000270078
N
0.704
MDP0000387366
Malus domestica
MDP0000387366
N
0.680
MDP0000499190
Malus domestica
MDP0000499190
N
0.704
MDP0000583070
Malus domestica
MDP0000583070
N
0.700
cassava10382.m1
Manihot esculenta
cassava10382.m1
N
0.749
cassava11157.m1
Manihot esculenta
cassava11157.m1
N
0.689
cassava24285.valid.m1
Manihot esculenta
cassava24285.valid.m1
N
0.683
cassava24286.valid.m1
Manihot esculenta
cassava24286.valid.m1
N
0.683
cassava32987.m1
Manihot esculenta
cassava32987.m1
N
0.703
cassava46504.m1
Manihot esculenta
cassava46504.m1
N
0.703
MTR_4g046737
Medicago truncatula
MTR_4g046737
N
0.661
MTR_5g009460
Medicago truncatula
MTR_5g009460
N
0.703
mgf009009m
Mimulus guttatus
mgf009009m
N
0.722
GSMUA_Achr10G09220_001
Musa acuminata
GSMUA_Achr10G09220_001
N
0.725
POPTR_0002s17030
Populus trichocarpa
POPTR_0002s17030
N
0.699
POPTR_0004s02060
Populus trichocarpa
POPTR_0004s02060
N
0.682
POPTR_0007s02510
Populus trichocarpa
POPTR_0007s02510
N
0.704
POPTR_0011s00390
Populus trichocarpa
POPTR_0011s00390
N
0.682
POPTR_0012s01420
Populus trichocarpa
POPTR_0012s01420
N
0.813
POPTR_0014s09200
Populus trichocarpa
POPTR_0014s09200
N
0.661
POPTR_0015s02310
Populus trichocarpa
POPTR_0015s02310
N
0.791
POPTR_0017s06470
Populus trichocarpa
POPTR_0017s06470
N
0.704
Pm009748
Prunus mume
Pm009748
N
0.704
Pm018400
Prunus mume
Pm018400
N
0.709
PRUPE_ppa014728mg
Prunus persica
PRUPE_ppa014728mg
N
0.680
PRUPE_ppa023853mg
Prunus persica
PRUPE_ppa023853mg
N
0.709
PRUPE_ppa023926mg
Prunus persica
PRUPE_ppa023926mg
N
0.704
29842.m003592
Ricinus communis
29842.m003592
N
0.682
30086.m000210
Ricinus communis
30086.m000210
N
0.682
30169.m006531
Ricinus communis
30169.m006531
N
0.840
SapurV1A.0013s0580
Salix purpurea
SapurV1A.0013s0580
N
0.681
SapurV1A.0190s0070
Salix purpurea
SapurV1A.0190s0070
N
0.690
SapurV1A.0345s0340
Salix purpurea
SapurV1A.0345s0340
N
0.682
SapurV1A.0346s0010
Salix purpurea
SapurV1A.0346s0010
N
0.813
SapurV1A.0377s0050
Salix purpurea
SapurV1A.0377s0050
N
0.813
SapurV1A.0722s0160
Salix purpurea
SapurV1A.0722s0160
N
0.696
SapurV1A.0779s0100
Salix purpurea
SapurV1A.0779s0100
N
0.704
SapurV1A.0928s0060
Salix purpurea
SapurV1A.0928s0060
N
0.704
SapurV1A.1106s0040
Salix purpurea
SapurV1A.1106s0040
N
0.682
SapurV1A.1227s0050
Salix purpurea
SapurV1A.1227s0050
N
0.813
SapurV1A.2295s0020
Salix purpurea
SapurV1A.2295s0020
N
0.690
SapurV1A.2893s0010
Salix purpurea
SapurV1A.2893s0010
N
0.690
Solyc01g095640.1
Solanum lycopersicum
Solyc01g095640.1
N
0.684
PGSC0003DMG400000212
Solanum tuberosum
PGSC0003DMG400000212
N
0.684
TCM_005177
Theobroma cacao
TCM_005177
N
0.703
TCM_011327
Theobroma cacao
TCM_011327
N
0.682
TCM_015351
Theobroma cacao
TCM_015351
N
0.784
TCM_016428
Theobroma cacao
TCM_016428
N
0.668
TCM_030163
Theobroma cacao
TCM_030163
N
0.663
TCM_046858
Theobroma cacao
TCM_046858
N
0.682
VIT_12s0059g02360
Vitis vinifera
VIT_12s0059g02360
N
0.682
VIT_15s0046g01130
Vitis vinifera
VIT_15s0046g01130
N
0.683
VIT_16s0050g02530
Vitis vinifera
VIT_16s0050g02530
N
0.670