GLYMA20G04240 (Glycine max)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GLYMA20G04240 T271805_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.872 0.914
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.767 0.774
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.767 0.774
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.745 0.742
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.745 0.742
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.739 0.774
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.739 0.774
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.709 0.753
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.709 0.753
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.695 0.785
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.695 0.785
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.688 0.763
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.670 0.720
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.670 0.720
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.666 0.785
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.666 0.774
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.666 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G04240.2 Myb 14 61
GLYMA20G04240.2 Myb 67 112

Links

Other Myb/SANT family TFs
Other Glycine max TFs

683 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g08576 Acanthocheilonema viteae nAv.1.0.1.g08576 N
ANCCEY_02227 Ancylostoma ceylanicum ANCCEY_02227 N
ACOC_0000909601 Angiostrongylus costaricensis ACOC_0000909601 N
ASIM_0001061401 Anisakis simplex ASIM_0001061401 N
ALUE_0000006201 Ascaris lumbricoides ALUE_0000006201 N
ASU_13814 Ascaris suum ASU_13814 N
Bm4196 Brugia malayi Bm4196 N
BTMF_0001047601 Brugia timori BTMF_0001047601 N
BTMF_0001685601 Brugia timori BTMF_0001685601 N
BXY_0116700 Bursaphelenchus xylophilus BXY_0116700 N
CBN28426 Caenorhabditis brenneri CBN28426 N
CBG14076 Caenorhabditis briggsae CBG14076 N
npax-2 Caenorhabditis elegans WBGene00018591 N
CJA16887 Caenorhabditis japonica CJA16887 N
CRE00936 Caenorhabditis remanei CRE00936 N
DICVIV_06612 Dictyocaulus viviparus DICVIV_06612 N
nDi.2.2.2.g00913 Dirofilaria immitis nDi.2.2.2.g00913 N
EVEC_0001355301 Enterobius vermicularis EVEC_0001355301 N
GPLIN_001118300 Globodera pallida GPLIN_001118300 N
HCOI00419700 Haemonchus contortus HCOI00419700 N
HPLM_0000886801 Haemonchus placei HPLM_0000886801 N
nLs.2.1.2.g06387 Litomosoides sigmodontis nLs.2.1.2.g06387 N
LOAG_16508 Loa loa LOAG_16508 N
NECAME_03708 Necator americanus NECAME_03708 N
NBR_0000487701 Nippostrongylus brasiliensis NBR_0000487701 N
OFLC_0000734201 Onchocerca flexuosa OFLC_0000734201 N
nOo.2.0.1.g07401 Onchocerca ochengi nOo.2.0.1.g07401 N
WBGene00239907 Onchocerca volvulus WBGene00239907 N
PTRK_0001095200 Parastrongyloides trichosuri PTRK_0001095200 N
scaffold1066-EXSNAP2012.3 Pristionchus exspectatus scaffold1066-EXSNAP2012.3 N
Ppa-npax-4 Pristionchus pacificus PPA03062 N
RSKR_0000509700 Rhabditophanes kr3021 RSKR_0000509700 N
L596_g148 Steinernema carpocapsae L596_g148 N
L889_g31190 Steinernema feltiae L889_g31190 N
L893_g14515 Steinernema glaseri L893_g14515 N
L898_g33187 Steinernema monticolum L898_g33187 N
L892_g12859 Steinernema scapterisci L892_g12859 N
SPAL_0000243500 Strongyloides papillosus SPAL_0000243500 N
SSTP_0000993700 Strongyloides stercoralis SSTP_0000993700 N
SVE_0001100 Strongyloides venezuelensis SVE_0001100 N
SMUV_0000429701 Syphacia muris SMUV_0000429701 N
TCLT_0000997101 Thelazia callipaeda TCLT_0000997101 N
TCNE_0000252101 Toxocara canis TCNE_0000252101 N
TCNE_0000151101 Toxocara canis TCNE_0000151101 N
WUBG_05014 Wuchereria bancrofti WUBG_05014 N