LELG_04897 (Lodderomyces elongisporus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LELG_04897 T273582_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REB1
M00063_2.00 		Saccharomyces cerevisiae
RTTACCCG
CGGGTAAY		 PBM
Badis et al.(2008)
REB1_4402 		0.665 0.571
REB1
M07491_2.00 		Saccharomyces cerevisiae
RTTACCCKN
NMGGGTAAY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0363.1 		0.665 0.571
REB1
M07553_2.00 		Saccharomyces cerevisiae
NVTTACCCKVH
DBMGGGTAABN		 ChIP-exo
Rhee et al.(2011)
Reb1_1 		0.665 0.571
REB1
M07554_2.00 		Saccharomyces cerevisiae
YACCACWMCCACWYACCMHMC
GKDKGGTRWGTGGKWGTGGTR		 ChIP-exo
Rhee et al.(2011)
Reb1_2 		0.665 0.571
REB1
M07555_2.00 		Saccharomyces cerevisiae
TYTCACATTCCACTCCAYKSC
GSMRTGGAGTGGAATGTGARA		 ChIP-exo
Rhee et al.(2011)
Reb1_3 		0.665 0.571
REB1
M08593_2.00 		Saccharomyces cerevisiae
RTTACCCGSMHDD
HHDKSCGGGTAAY		 Misc
DeBoer et al.(2011)
YBR049C_907 		0.665 0.571
REB1
M11062_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$REB1_B 		0.665 0.571
REB1
M11063_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$REB1_Q5 		0.665 0.571
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDK46716 Myb 259 303
EDK46716 Myb 311 329
EDK46716 Myb 368 404

Links

Other Myb/SANT family TFs
Other Lodderomyces elongisporus TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_08298 Ancylostoma caninum ANCCAN_08298 N
ACOC_0000165301 Angiostrongylus costaricensis ACOC_0000165301 N
ASIM_0001210001 Anisakis simplex ASIM_0001210001 N
ASIM_0001432701 Anisakis simplex ASIM_0001432701 N
ALUE_0000981201 Ascaris lumbricoides ALUE_0000981201 N
ASU_03242 Ascaris suum ASU_03242 N
Bm3947 Brugia malayi Bm3947 N
BTMF_0000795401 Brugia timori BTMF_0000795401 N
DICVIV_11308 Dictyocaulus viviparus DICVIV_11308 N
nDi.2.2.2.g05314 Dirofilaria immitis nDi.2.2.2.g05314 N
DME_0000578001 Dracunculus medinensis DME_0000578001 N
EEL_0000453801 Elaeophora elaphi EEL_0000453801 N
EVEC_0000523501 Enterobius vermicularis EVEC_0000523501 N
GPUH_0001715901 Gongylonema pulchrum GPUH_0001715901 N
HCOI00597600 Haemonchus contortus HCOI00597600 N
HPLM_0001056701 Haemonchus placei HPLM_0001056701 N
HPBE_0000675601 Heligmosomoides bakeri HPBE_0000675601 N
nLs.2.1.2.g03126 Litomosoides sigmodontis nLs.2.1.2.g03126 N
LOAG_02128 Loa loa LOAG_02128 N
OESDEN_02210 Oesophagostomum dentatum OESDEN_02210 N
OFLC_0000425901 Onchocerca flexuosa OFLC_0000425901 N
nOo.2.0.1.g03279 Onchocerca ochengi nOo.2.0.1.g03279 N
scaffold259-EXSNAP2012.8 Pristionchus exspectatus scaffold259-EXSNAP2012.8 N
Ppa-tlf-1 Pristionchus pacificus PPA12059 N
SMUV_0000869101 Syphacia muris SMUV_0000869101 N
TCLT_0000474901 Thelazia callipaeda TCLT_0000474901 N
TCNE_0000853601 Toxocara canis TCNE_0000853601 N
WUBG_01280 Wuchereria bancrofti WUBG_01280 N