Sb02g024640 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb02g024640 T279140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.741 0.872
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.741 0.872
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.738 0.872
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.738 0.872
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.738 0.872
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.738 0.872
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.728 0.851
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.710 0.862
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.710 0.862
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g024640.1 Myb 14 60
Sb02g024640.1 Myb 66 112

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

299 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001480 Acyrthosiphon pisum ACYPI001480 N 0.000
AAEL000181 Aedes aegypti AAEL000181 N 0.000
AMTR_s00023p00232620 Amborella trichopoda AMTR_s00023p00232620 N 0.000
AALB009551 Anopheles albimanus AALB009551 N 0.000
AARA006496 Anopheles arabiensis AARA006496 N 0.000
AATE004647 Anopheles atroparvus AATE004647 N 0.000
ACHR006211 Anopheles christyi ACHR006211 N 0.000
ACOM033657 Anopheles coluzzii ACOM033657 N 0.000
ACUA025632 Anopheles culicifacies ACUA025632 N 0.000
ADAC005840 Anopheles darlingi ADAC005840 N 0.000
ADIR010123 Anopheles dirus ADIR010123 N 0.000
AEPI009418 Anopheles epiroticus AEPI009418 N 0.000
AFAF001135 Anopheles farauti AFAF001135 N 0.000
AFUN001272 Anopheles funestus AFUN001272 N 0.000
AGAP001099 Anopheles gambiae AGAP001099 N 0.000
AMAM022417 Anopheles maculatus AMAM022417 N 0.000
AMEC012325 Anopheles melas AMEC012325 N 0.000
AMEM003228 Anopheles merus AMEM003228 N 0.000
AMIN002364 Anopheles minimus AMIN002364 N 0.000
AQUA001810 Anopheles quadriannulatus AQUA001810 N 0.000
ASIS018375 Anopheles sinensis ASIS018375 N 0.000
ASTEI10740 Anopheles stephensi ASTEI10740 N 0.000
GB42921 Apis mellifera GB42921 N 0.000
ENSAMXG00000020941 Astyanax mexicanus ENSAMXG00000020941 N 0.000
ACEP25803 Atta cephalotes ACEP25803 N 0.000
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.000
BGIBMGA010711 Bombyx mori BGIBMGA010711 N 0.000
CBN07735 Caenorhabditis brenneri CBN07735 N 0.000
CBN31697 Caenorhabditis brenneri CBN31697 N 0.000
CBG11867 Caenorhabditis briggsae CBG11867 N 0.000
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.000
CJA03316 Caenorhabditis japonica CJA03316 N 0.000
CJA30740 Caenorhabditis japonica CJA30740 N 0.000
CRE14258 Caenorhabditis remanei CRE14258 N 0.000
Cflo_01038--XP_625055.2_APIME Camponotus floridanus Cflo_01038--XP_625055.2_APIME N 0.000
CGI_10018256 Crassostrea gigas CGI_10018256 N 0.000
CpipJ_CPIJ007271 Culex pipiens CpipJ_CPIJ007271 N 0.000
CPIJ007271 Culex quinquefasciatus CPIJ007271 N 0.000
KGM_06850 Danaus plexippus KGM_06850 N 0.000
DAPPUDRAFT_304382 Daphnia pulex DAPPUDRAFT_304382 N 0.000
YQE_05481 Dendroctonus ponderosae YQE_05481 N 0.000
GF23180 Drosophila ananassae FBgn0100174 N 0.000
GG12321 Drosophila erecta FBgn0104611 N 0.000
GH18462 Drosophila grimshawi FBgn0125929 N 0.000
polybromo Drosophila melanogaster FBgn0039227 N 0.000
GI24041 Drosophila mojavensis FBgn0146764 N 0.000
GL13862 Drosophila persimilis FBgn0151467 N 0.000
GA10956 Drosophila pseudoobscura FBgn0071012 N 0.000
GM22062 Drosophila sechellia FBgn0176933 N 0.000
GJ23670 Drosophila virilis FBgn0210767 N 0.000
GK13168 Drosophila willistoni FBgn0215177 N 0.000
GE10775 Drosophila yakuba FBgn0228617 N 0.000
Hsal_02676--XP_625055.2_APIME Harpegnathos saltator Hsal_02676--XP_625055.2_APIME N 0.000
HMEL006186 Heliconius melpomene HMEL006186 N 0.000
ISCW008318 Ixodes scapularis ISCW008318 N 0.000
ISCW005293 Ixodes scapularis ISCW005293 N 0.000
LDEC007066 Leptinotarsa decemlineata LDEC007066 N 0.000
LotgiG176647 Lottia gigantea LotgiG176647 N 0.000
LCUP007789 Lucilia cuprina LCUP007789 N 0.000
MESCA007902 Megaselia scalaris MESCA007902 N 0.000
MhA1_Contig232.frz3.gene23 Meloidogyne hapla MhA1_Contig232.frz3.gene23 N 0.000
Minc06622 Meloidogyne incognita Minc06622 N 0.000
MDOA008474 Musca domestica MDOA008474 N 0.000
NEMVEDRAFT_v1g240009 Nematostella vectensis NEMVEDRAFT_v1g240009 N 0.000
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.000
PHUM244090 Pediculus humanus PHUM244090 N 0.000
PPAI002532 Phlebotomus papatasi PPAI002532 N 0.000
scaffold517-EXSNAP2012.7 Pristionchus exspectatus scaffold517-EXSNAP2012.7 N 0.000
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.000
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.000
RPRC014309 Rhodnius prolixus RPRC014309 N 0.000
Sakowv30022291m.g Saccoglossus kowalevskii Sakowv30022291m.g N 0.000
SINV16486 Solenopsis invicta SINV16486 N 0.000
L889_g13125 Steinernema feltiae L889_g13125 N 0.000
L898_g14011 Steinernema monticolum L898_g14011 N 0.000
SMAR009325 Strigamia maritima SMAR009325 N 0.000
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.000
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.000
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.000
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.000
tetur31g01070 Tetranychus urticae tetur31g01070 N 0.000
tetur31g00840 Tetranychus urticae tetur31g00840 N 0.000
tetur31g00660 Tetranychus urticae tetur31g00660 N 0.000
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.000
TC000618 Tribolium castaneum TC000618 N 0.000
EFV52201 Trichinella spiralis EFV52201 N 0.000
L798_12146 Zootermopsis nevadensis L798_12146 N 0.000