Traes_5DL_B2F166A31 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_5DL_B2F166A31 T281197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.821 0.851
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.813 0.851
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.813 0.851
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.813 0.851
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.813 0.851
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.813 0.851
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.813 0.851
HHO6
M07024_2.00 		Arabidopsis thaliana
GAATCTNNDAT
ATHNNAGATTC		 Dap-seq
OMalley et al.(2016)
AT1G49560_col_a 		0.803 0.872
HHO6
M07025_2.00 		Arabidopsis thaliana
DGAATCTHNGATHCN
NGDATCNDAGATTCH		 Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a 		0.803 0.872
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.772 0.830
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.767 0.851
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.767 0.851
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.742 0.830
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.742 0.830
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.742 0.830
PK14402.1
M02352_2.00 		Cannabis sativa
NDWGATTCSNN
NNSGAATCWHN		 PBM
Weirauch et al.(2014)
pTH9491 		0.732 0.851
HHO5
M07112_2.00 		Arabidopsis thaliana
HNDAAGATTCH
DGAATCTTHND		 Dap-seq
OMalley et al.(2016)
AT4G37180_col_a 		0.709 0.851
HHO5
M07113_2.00 		Arabidopsis thaliana
NNDAAGATTCY
RGAATCTTHNN		 Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a 		0.709 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_5DL_B2F166A31.2 Myb 143 194

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

361 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_24487 Aegilops tauschii F775_24487 N
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I
Bra012244 Brassica rapa Bra012244 N
Bra016455 Brassica rapa Bra016455 N
PK14705.1 Cannabis sativa PK14705.1 I
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I
GLYMA01G28820 Glycine max GLYMA01G28820 I
GLYMA02G25940 Glycine max GLYMA02G25940 N
GLYMA03G08270 Glycine max GLYMA03G08270 I
GLYMA16G22060 Glycine max GLYMA16G22060 I
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I
LOAG_08062 Loa loa LOAG_08062 N
MTR_8g018100 Medicago truncatula MTR_8g018100 N
mgf012563m Mimulus guttatus mgf012563m I
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I
SapurV1A.0491s0160 Salix purpurea SapurV1A.0491s0160 N
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I
Si007288m.g Setaria italica Si007288m.g I
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I
TCM_042534 Theobroma cacao TCM_042534 I
TCM_018380 Theobroma cacao TCM_018380 I
Traes_6DL_F46673879 Triticum aestivum Traes_6DL_F46673879 N
TRIUR3_05701 Triticum urartu TRIUR3_05701 N
WUBG_06999 Wuchereria bancrofti WUBG_06999 N
GRMZM5G834758 Zea mays GRMZM5G834758 I
GRMZM2G144398 Zea mays GRMZM2G144398 N
GRMZM2G024247 Zea mays GRMZM2G024247 N
AC186524.3_FG005 Zea mays AC186524.3_FG005 N