AC186524.3_FG005 (Zea mays)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AC186524.3_FG005 T326276_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AC186524.3_FGP005 Sox 154 198

Links

Other Sox family TFs
Other Zea mays TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.618
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.582
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.582
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.566
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.539
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.527
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.523
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.523
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.517
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.517
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.511
Si007288m.g Setaria italica Si007288m.g I 0.510
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.510
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.496
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.493
TCM_042534 Theobroma cacao TCM_042534 I 0.482
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.479
RTG_00841 Rhodotorula glutinis RTG_00841 N 0.470
PK14705.1 Cannabis sativa PK14705.1 I 0.469
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.468
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.468
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N 0.468
Bra012244 Brassica rapa Bra012244 N 0.465
Bra016455 Brassica rapa Bra016455 N 0.465
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.464
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.463
Traes_6DL_F46673879 Triticum aestivum Traes_6DL_F46673879 N 0.461
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.460
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.452
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.451
L798_04020 Zootermopsis nevadensis L798_04020 N 0.448
L798_09360 Zootermopsis nevadensis L798_09360 N 0.448
SapurV1A.0491s0160 Salix purpurea SapurV1A.0491s0160 N 0.448
EVEC_0001116801 Enterobius vermicularis EVEC_0001116801 N 0.448
GRMZM2G156785 Zea mays GRMZM2G156785 N 0.437
GRMZM2G324727 Zea mays GRMZM2G324727 N 0.437
Sb04g032180 Sorghum bicolor Sb04g032180 N 0.437
Si018635m.g Setaria italica Si018635m.g N 0.437
Traes_1DL_ED7FDC748 Triticum aestivum Traes_1DL_ED7FDC748 N 0.436
OESDEN_22493 Oesophagostomum dentatum OESDEN_22493 N 0.436
DAPPUDRAFT_37735 Daphnia pulex DAPPUDRAFT_37735 I 0.434
SPER_0000213401 Spirometra erinaceieuropaei SPER_0000213401 N 0.434
BGIOSGA008782 Oryza indica BGIOSGA008782 N 0.433
BRADI3G51140 Brachypodium distachyon BRADI3G51140 N 0.433
GRMZM2G013821 Zea mays GRMZM2G013821 N 0.433
LPERR02G22240 Leersia perrieri LPERR02G22240 N 0.433
OB02G34710 Oryza brachyantha OB02G34710 N 0.433
OBART02G27340 Oryza barthii OBART02G27340 N 0.433
OGLUM02G27900 Oryza glumaepatula OGLUM02G27900 N 0.433
OMERI02G26620 Oryza meridionalis OMERI02G26620 N 0.433
ONIVA02G29880 Oryza nivara ONIVA02G29880 N 0.433
OPUNC02G25020 Oryza punctata OPUNC02G25020 N 0.433
ORUFI02G28820 Oryza rufipogon ORUFI02G28820 N 0.433
OS02G0670400 Oryza sativa OS02G0670400 N 0.433
Pavir.Fb00026 Panicum virgatum Pavir.Fb00026 N 0.431
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.429
CpipJ_CPIJ014016 Culex pipiens CpipJ_CPIJ014016 N 0.428
CPIJ014016 Culex quinquefasciatus CPIJ014016 N 0.428
sox9b Danio rerio ENSDARG00000043923 I 0.428
ENSDORG00000003967 Dipodomys ordii ENSDORG00000003967 I 0.428
ENSDORG00000012440 Dipodomys ordii ENSDORG00000012440 I 0.428
SOX10 Erinaceus europaeus ENSEEUG00000011263 I 0.428
ENSFALG00000002572 Ficedula albicollis ENSFALG00000002572 I 0.428
SOX10 Ochotona princeps ENSOPRG00000013575 I 0.428
SOX10 Procavia capensis ENSPCAG00000005913 I 0.428
ENSPMAG00000010371 Petromyzon marinus ENSPMAG00000010371 I 0.428
ENSPSIG00000009504 Pelodiscus sinensis ENSPSIG00000009504 I 0.428
SOX9 Pteropus vampyrus ENSPVAG00000010505 I 0.428
ENSVPAG00000000908 Vicugna pacos ENSVPAG00000000908 I 0.428
ISCW009925 Ixodes scapularis ISCW009925 I 0.428
LotgiG88815 Lottia gigantea LotgiG88815 I 0.428
RPRC012780 Rhodnius prolixus RPRC012780 I 0.428
TC003791 Tribolium castaneum TC003791 I 0.428
Hsal_04828--XP_001122993.1_APIME Harpegnathos saltator Hsal_04828--XP_001122993.1_APIME I 0.428
PK25712.1 Cannabis sativa PK25712.1 N 0.428
XP_002935939 Xenopus tropicalis XP_002935939 I 0.428
AARA011914 Anopheles arabiensis AARA011914 I 0.428
AATE006542 Anopheles atroparvus AATE006542 N 0.428
ACOM034662 Anopheles coluzzii ACOM034662 I 0.428
ACUA026266 Anopheles culicifacies ACUA026266 I 0.428
AMEC016085 Anopheles melas AMEC016085 I 0.428
AMIN001219 Anopheles minimus AMIN001219 I 0.428
AQUA004309 Anopheles quadriannulatus AQUA004309 I 0.428
BGLB010904 Biomphalaria glabrata BGLB010904 I 0.428
RO3G_05566 Rhizopus oryzae RO3G_05566 N 0.427
EFV48447 Trichinella spiralis EFV48447 I 0.427
ENSLOCG00000004648 Lepisosteus oculatus ENSLOCG00000004648 I 0.427
OS04G0564600 Oryza sativa OS04G0564600 N 0.427
TPHA_0C04350 Tetrapisispora phaffii TPHA_0C04350 N 0.426
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.426
GPUH_0001196001 Gongylonema pulchrum GPUH_0001196001 N 0.426
PPAI009257 Phlebotomus papatasi PPAI009257 N 0.424
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.424
MPER_04184 Moniliophthora perniciosa MPER_04184 N 0.423
BGIOSGA016928 Oryza indica BGIOSGA016928 N 0.420
OB04G28810 Oryza brachyantha OB04G28810 N 0.420
OBART04G21800 Oryza barthii OBART04G21800 N 0.420
OGLUM04G21840 Oryza glumaepatula OGLUM04G21840 N 0.420
OMERI04G18350 Oryza meridionalis OMERI04G18350 N 0.420
ONIVA04G20340 Oryza nivara ONIVA04G20340 N 0.420
OPUNC04G19550 Oryza punctata OPUNC04G19550 N 0.420
ORGLA04G0188600 Oryza glaberrima ORGLA04G0188600 N 0.420
ORUFI04G23400 Oryza rufipogon ORUFI04G23400 N 0.420
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.420
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.420
CpipJ_CPIJ014424 Culex pipiens CpipJ_CPIJ014424 I 0.418
CPIJ014424 Culex quinquefasciatus CPIJ014424 I 0.418
ENSMEUG00000015665 Macropus eugenii ENSMEUG00000015665 I 0.418
TCM_018380 Theobroma cacao TCM_018380 I 0.418
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.418
L798_02392 Zootermopsis nevadensis L798_02392 I 0.417
ACEP25270 Atta cephalotes ACEP25270 N 0.416
HBP1 Homo sapiens ENSG00000105856 D 0.416
GSMUA_Achr2G11060_001 Musa acuminata GSMUA_Achr2G11060_001 I 0.416