PK25712.1 (Cannabis sativa)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PK25712.1 T334936_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK25712.1 Sox 50 85

Links

Other Sox family TFs
Other Cannabis sativa TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.507
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.507
GLYMA01G28253 Glycine max GLYMA01G28253 N 0.485
L798_04020 Zootermopsis nevadensis L798_04020 N 0.485
L798_09360 Zootermopsis nevadensis L798_09360 N 0.485
GRMZM2G144398 Zea mays GRMZM2G144398 N 0.477
mgf012563m Mimulus guttatus mgf012563m I 0.476
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.475
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.475
TCM_018380 Theobroma cacao TCM_018380 I 0.470
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.465
Bra012244 Brassica rapa Bra012244 N 0.460
Bra016455 Brassica rapa Bra016455 N 0.456
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.449
GPUH_0001196001 Gongylonema pulchrum GPUH_0001196001 N 0.449
HBP1 Homo sapiens ENSG00000105856 D 0.446
SOX13 Felis catus ENSFCAG00000002900 I 0.444
ENSTGUG00000002931 Taeniopygia guttata ENSTGUG00000002931 I 0.444
D918_08316 Trichuris suis D918_08316 N 0.444
Traes_6DL_F46673879 Triticum aestivum Traes_6DL_F46673879 N 0.440
RSKR_0000394100 Rhabditophanes kr3021 RSKR_0000394100 N 0.440
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.439
SOX6 Choloepus hoffmanni ENSCHOG00000005751 I 0.438
SOX6 Erinaceus europaeus ENSEEUG00000006749 I 0.438
SOX6 Echinops telfairi ENSETEG00000001898 I 0.438
ENSMEUG00000008151 Macropus eugenii ENSMEUG00000008151 I 0.438
SOX13 Microcebus murinus ENSMICG00000009236 I 0.438
SOX6 Procavia capensis ENSPCAG00000001398 N 0.438
SOX5 Sorex araneus ENSSARG00000007963 I 0.438
SOX6 Tupaia belangeri ENSTBEG00000002476 I 0.438
ENSTSYG00000012536 Tarsius syrichta ENSTSYG00000012536 I 0.438
TCLT_0000083701 Thelazia callipaeda TCLT_0000083701 I 0.438
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.437
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.437
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.433
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.433
GH23191 Drosophila grimshawi FBgn0130648 N 0.431
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.431
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.428
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.428
PPA10381 Pristionchus pacificus PPA10381 N 0.427
NBR_0000051501 Nippostrongylus brasiliensis NBR_0000051501 N 0.427
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.427
GLYMA02G25940 Glycine max GLYMA02G25940 N 0.425
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.425
H101_08199 Trichophyton interdigitale H101_08199 N 0.423
ACEP10855 Atta cephalotes ACEP10855 I 0.420
SOX17 Procavia capensis ENSPCAG00000003188 I 0.419
BGIBMGA003080 Bombyx mori BGIBMGA003080 I 0.415
SapurV1A.0248s0170 Salix purpurea SapurV1A.0248s0170 I 0.415
LCUP001585 Lucilia cuprina LCUP001585 I 0.415
0600010013 Ostreococcus tauri 0600010013 I 0.415
AARA005391 Anopheles arabiensis AARA005391 I 0.415
ACOM022800 Anopheles coluzzii ACOM022800 I 0.415
AEPI003628 Anopheles epiroticus AEPI003628 I 0.415
AMEC012053 Anopheles melas AMEC012053 I 0.415
AMEM014190 Anopheles merus AMEM014190 I 0.415
AMIN009301 Anopheles minimus AMIN009301 I 0.415
ASTEI06407 Anopheles stephensi ASTEI06407 I 0.415
LLOJ005525 Lutzomyia longipalpis LLOJ005525 I 0.415
NBR_0000360901 Nippostrongylus brasiliensis NBR_0000360901 I 0.415
NBR_0002216901 Nippostrongylus brasiliensis NBR_0002216901 I 0.415