NBR_0000051501 (Nippostrongylus brasiliensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 NBR_0000051501 T336649_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0000051501-mRNA-1 Sox 19 66

Links

Other Sox family TFs
Other Nippostrongylus brasiliensis TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPBE_0002300401 Heligmosomoides bakeri HPBE_0002300401 N 0.696
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.686
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.680
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.614
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N 0.612
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.585
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.580
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.566
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.561
NECAME_06830 Necator americanus NECAME_06830 N 0.548
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.522
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.510
CJA17191 Caenorhabditis japonica CJA17191 N 0.506
TOX2 Sorex araneus ENSSARG00000001080 N 0.504
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.504
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.497
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.497
ASU_00726 Ascaris suum ASU_00726 N 0.497
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.485
D915_12649 Fasciola hepatica D915_12649 N 0.480
AZW_EuGene.0200010417 Micromonas sp RCC299 AZW_EuGene.0200010417 I 0.474
BGHDH14_bgh06194 Blumeria graminis BGHDH14_bgh06194 I 0.472
PHUM393920 Pediculus humanus PHUM393920 N 0.470
L798_00437 Zootermopsis nevadensis L798_00437 N 0.469
AMIN005634 Anopheles minimus AMIN005634 N 0.469
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.463
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.463
AEPI010254 Anopheles epiroticus AEPI010254 N 0.463
AMAM014030 Anopheles maculatus AMAM014030 N 0.463
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.461
CBN15844 Caenorhabditis brenneri CBN15844 N 0.459
HMGB1 Ornithorhynchus anatinus ENSOANG00000011494 N 0.457
pbrm1l Danio rerio ENSDARG00000077038 N 0.451
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.451
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.451
D918_03887 Trichuris suis D918_03887 N 0.451
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.449
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N 0.447
YAB2 Vitis vinifera VIT_06s0009g00880 I 0.447
mgf009982m Mimulus guttatus mgf009982m I 0.447
TRE_0001899601 Trichobilharzia regenti TRE_0001899601 N 0.446
AMTR_s00004p00165390 Amborella trichopoda AMTR_s00004p00165390 I 0.443
AMTR_s00085p00032940 Amborella trichopoda AMTR_s00085p00032940 I 0.443
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.443
BGIOSGA025976 Oryza indica BGIOSGA025976 I 0.443
GLYMA06G10110 Glycine max GLYMA06G10110 I 0.443
GSMUA_Achr5G23610_001 Musa acuminata GSMUA_Achr5G23610_001 I 0.443
ISCW005293 Ixodes scapularis ISCW005293 N 0.443
LPERR07G16630 Leersia perrieri LPERR07G16630 I 0.443
OB07G25220 Oryza brachyantha OB07G25220 I 0.443
OLONG_001420 Oryza longistaminata OLONG_001420 I 0.443
OMERI07G16070 Oryza meridionalis OMERI07G16070 I 0.443
ORGLA07G0250200 Oryza glaberrima ORGLA07G0250200 I 0.443
PGSC0003DMG400002883 Solanum tuberosum PGSC0003DMG400002883 I 0.443
PRUPE_ppa023883mg Prunus persica PRUPE_ppa023883mg I 0.443
Solyc05g005240.1 Solanum lycopersicum Solyc05g005240.1 I 0.443
Solyc12g009580.1 Solanum lycopersicum Solyc12g009580.1 I 0.443
INO Vitis vinifera VIT_01s0127g00330 I 0.443
Cla016962 Citrullus lanatus Cla016962 I 0.443
Pm006709 Prunus mume Pm006709 I 0.443
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.443
Cucsa.132170 Cucumis sativus Cucsa.132170 I 0.443
mgf023167m Mimulus guttatus mgf023167m I 0.443
evm.TU.supercontig_69.72 Carica papaya evm.TU.supercontig_69.72 I 0.443
Lus10019407.g Linum usitatissimum Lus10019407.g I 0.443
MDP0000126221 Malus domestica MDP0000126221 I 0.443
MDP0000263713 Malus domestica MDP0000263713 I 0.443
PDK_20s1781371g001 Phoenix dactylifera PDK_20s1781371g001 I 0.443
EuGene.0000040541 Micromonas pusilla EuGene.0000040541 I 0.440
TCM_031868 Theobroma cacao TCM_031868 I 0.437
Gorai.002G054200 Gossypium raimondii Gorai.002G054200 I 0.437
GRMZM2G046829 Zea mays GRMZM2G046829 I 0.436
Pavir.Ba00601 Panicum virgatum Pavir.Ba00601 I 0.436
Pavir.Bb03145 Panicum virgatum Pavir.Bb03145 I 0.436
NEUTE1DRAFT_130971 Neurospora tetrasperma NEUTE1DRAFT_130971 N 0.433
CRE28315 Caenorhabditis remanei CRE28315 N 0.432
PK25712.1 Cannabis sativa PK25712.1 N 0.427
gw1.2.1056.1 Mucor circinelloides gw1.2.1056.1 N 0.426
H101_08199 Trichophyton interdigitale H101_08199 N 0.425
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.425
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.425
NCU06874 Neurospora crassa NCU06874 N 0.423
ISCW008318 Ixodes scapularis ISCW008318 N 0.422
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.422
Sakowv30021656m.g Saccoglossus kowalevskii Sakowv30021656m.g N 0.421
BGIOSGA014650 Oryza indica BGIOSGA014650 I 0.418
GRMZM2G005353 Zea mays GRMZM2G005353 I 0.418
GRMZM2G054795 Zea mays GRMZM2G054795 I 0.418
LPERR04G16190 Leersia perrieri LPERR04G16190 I 0.418
OB04G27010 Oryza brachyantha OB04G27010 I 0.418
OBART04G20010 Oryza barthii OBART04G20010 I 0.418
OGLUM04G19890 Oryza glumaepatula OGLUM04G19890 I 0.418
OMERI04G17000 Oryza meridionalis OMERI04G17000 I 0.418
ONIVA04G18220 Oryza nivara ONIVA04G18220 I 0.418
ORGLA04G0171000 Oryza glaberrima ORGLA04G0171000 I 0.418
ORUFI04G21570 Oryza rufipogon ORUFI04G21570 I 0.418
YAB5 Oryza sativa OS04G0536300 I 0.418
Sb06g023770 Sorghum bicolor Sb06g023770 I 0.418
Si010859m.g Setaria italica Si010859m.g I 0.418
gw1.1.1099.1 Micromonas pusilla gw1.1.1099.1 N 0.418
Pavir.Ga00891 Panicum virgatum Pavir.Ga00891 I 0.418
Pavir.Gb00743 Panicum virgatum Pavir.Gb00743 I 0.418