HPBE_0002300401 (Heligmosomoides bakeri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 HPBE_0002300401 T336468_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0002300401-mRNA-1 Sox 53 100

Links

Other Sox family TFs
Other Heligmosomoides bakeri TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NBR_0000051501 Nippostrongylus brasiliensis NBR_0000051501 N 0.696
TELCIR_25179 Teladorsagia circumcincta TELCIR_25179 N 0.654
TELCIR_19210 Teladorsagia circumcincta TELCIR_19210 N 0.647
SNAPOd2T00002710001 Oikopleura dioica SNAPOd2T00002710001 I 0.614
Hba_16915 Heterorhabditis bacteriophora Hba_16915 I 0.587
HPLM_0002008001 Haemonchus placei HPLM_0002008001 N 0.573
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.560
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.555
SVUK_0000686401 Strongylus vulgaris SVUK_0000686401 N 0.553
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.516
TOX2 Sorex araneus ENSSARG00000001080 N 0.510
NECAME_06830 Necator americanus NECAME_06830 N 0.510
CJA17191 Caenorhabditis japonica CJA17191 N 0.506
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.504
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.497
ALUE_0000699101 Ascaris lumbricoides ALUE_0000699101 N 0.497
ASU_00726 Ascaris suum ASU_00726 N 0.497
TCNE_0000652201 Toxocara canis TCNE_0000652201 N 0.497
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.485
AZW_EuGene.0200010417 Micromonas sp RCC299 AZW_EuGene.0200010417 I 0.481
D915_12649 Fasciola hepatica D915_12649 N 0.480
BGHDH14_bgh06194 Blumeria graminis BGHDH14_bgh06194 I 0.478
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.469
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.469
AEPI010254 Anopheles epiroticus AEPI010254 N 0.469
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.467
L798_00437 Zootermopsis nevadensis L798_00437 N 0.463
PHUM393920 Pediculus humanus PHUM393920 N 0.463
AMAM014030 Anopheles maculatus AMAM014030 N 0.463
AMIN005634 Anopheles minimus AMIN005634 N 0.463
CBN15844 Caenorhabditis brenneri CBN15844 N 0.459
HMGB1 Ornithorhynchus anatinus ENSOANG00000011494 N 0.457
GSMUA_Achr5G23610_001 Musa acuminata GSMUA_Achr5G23610_001 I 0.455
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N 0.453
YAB2 Vitis vinifera VIT_06s0009g00880 I 0.453
mgf009982m Mimulus guttatus mgf009982m I 0.453
pbrm1l Danio rerio ENSDARG00000077038 N 0.451
pbrm1l Tetraodon nigroviridis ENSTNIG00000014731 N 0.451
pbrm1l Takifugu rubripes ENSTRUG00000005335 N 0.451
D918_03887 Trichuris suis D918_03887 N 0.451
AMTR_s00004p00165390 Amborella trichopoda AMTR_s00004p00165390 I 0.449
AMTR_s00085p00032940 Amborella trichopoda AMTR_s00085p00032940 I 0.449
AMTR_s00096p00054100 Amborella trichopoda AMTR_s00096p00054100 I 0.449
GLYMA06G10110 Glycine max GLYMA06G10110 I 0.449
LPERR07G16630 Leersia perrieri LPERR07G16630 I 0.449
PGSC0003DMG400002883 Solanum tuberosum PGSC0003DMG400002883 I 0.449
PRUPE_ppa023883mg Prunus persica PRUPE_ppa023883mg I 0.449
Solyc05g005240.1 Solanum lycopersicum Solyc05g005240.1 I 0.449
Solyc12g009580.1 Solanum lycopersicum Solyc12g009580.1 I 0.449
INO Vitis vinifera VIT_01s0127g00330 I 0.449
Cla016962 Citrullus lanatus Cla016962 I 0.449
Pm006709 Prunus mume Pm006709 I 0.449
cassava26804.m1 Manihot esculenta cassava26804.m1 I 0.449
Cucsa.132170 Cucumis sativus Cucsa.132170 I 0.449
mgf023167m Mimulus guttatus mgf023167m I 0.449
Lus10019407.g Linum usitatissimum Lus10019407.g I 0.449
MDP0000126221 Malus domestica MDP0000126221 I 0.449
MDP0000263713 Malus domestica MDP0000263713 I 0.449
PDK_20s1781371g001 Phoenix dactylifera PDK_20s1781371g001 I 0.449
TRE_0001899601 Trichobilharzia regenti TRE_0001899601 N 0.446
BGIOSGA025976 Oryza indica BGIOSGA025976 I 0.443
ISCW005293 Ixodes scapularis ISCW005293 N 0.443
OB07G25220 Oryza brachyantha OB07G25220 I 0.443
OLONG_001420 Oryza longistaminata OLONG_001420 I 0.443
OMERI07G16070 Oryza meridionalis OMERI07G16070 I 0.443
ORGLA07G0250200 Oryza glaberrima ORGLA07G0250200 I 0.443
TCM_031868 Theobroma cacao TCM_031868 I 0.443
evm.TU.supercontig_69.72 Carica papaya evm.TU.supercontig_69.72 I 0.443
Gorai.002G054200 Gossypium raimondii Gorai.002G054200 I 0.443
DICVIV_02621 Dictyocaulus viviparus DICVIV_02621 N 0.443
GRMZM2G046829 Zea mays GRMZM2G046829 I 0.442
EuGene.0000040541 Micromonas pusilla EuGene.0000040541 I 0.440
Pavir.Ba00601 Panicum virgatum Pavir.Ba00601 I 0.436
Pavir.Bb03145 Panicum virgatum Pavir.Bb03145 I 0.436
PK25712.1 Cannabis sativa PK25712.1 N 0.433
CRE28315 Caenorhabditis remanei CRE28315 N 0.432
H101_08199 Trichophyton interdigitale H101_08199 N 0.432
NEUTE1DRAFT_130971 Neurospora tetrasperma NEUTE1DRAFT_130971 N 0.432
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.432
BGIOSGA014650 Oryza indica BGIOSGA014650 I 0.425
GRMZM2G005353 Zea mays GRMZM2G005353 I 0.425
GRMZM2G054795 Zea mays GRMZM2G054795 I 0.425
LPERR04G16190 Leersia perrieri LPERR04G16190 I 0.425
OB04G27010 Oryza brachyantha OB04G27010 I 0.425
OBART04G20010 Oryza barthii OBART04G20010 I 0.425
OGLUM04G19890 Oryza glumaepatula OGLUM04G19890 I 0.425
OMERI04G17000 Oryza meridionalis OMERI04G17000 I 0.425
ONIVA04G18220 Oryza nivara ONIVA04G18220 I 0.425
ORGLA04G0171000 Oryza glaberrima ORGLA04G0171000 I 0.425
ORUFI04G21570 Oryza rufipogon ORUFI04G21570 I 0.425
YAB5 Oryza sativa OS04G0536300 I 0.425
Sb06g023770 Sorghum bicolor Sb06g023770 I 0.425
Si010859m.g Setaria italica Si010859m.g I 0.425
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.425
Pavir.Ga00891 Panicum virgatum Pavir.Ga00891 I 0.425
Pavir.Gb00743 Panicum virgatum Pavir.Gb00743 I 0.425
NCU06874 Neurospora crassa NCU06874 N 0.423
ISCW008318 Ixodes scapularis ISCW008318 N 0.422
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.422
AC186524.3_FG005 Zea mays AC186524.3_FG005 N 0.420
BRADI3G50050 Brachypodium distachyon BRADI3G50050 I 0.420
BRADI5G16910 Brachypodium distachyon BRADI5G16910 I 0.420
F775_25525 Aegilops tauschii F775_25525 I 0.420
F775_27799 Aegilops tauschii F775_27799 I 0.420
GLYMA05G04260 Glycine max GLYMA05G04260 I 0.420
GLYMA17G14710 Glycine max GLYMA17G14710 I 0.420
GRMZM2G529859 Zea mays GRMZM2G529859 I 0.420
GSMUA_Achr11G03800_001 Musa acuminata GSMUA_Achr11G03800_001 I 0.420
GSMUA_Achr11G17520_001 Musa acuminata GSMUA_Achr11G17520_001 I 0.420
GSMUA_Achr7G07130_001 Musa acuminata GSMUA_Achr7G07130_001 I 0.420
GSMUA_Achr8G11580_001 Musa acuminata GSMUA_Achr8G11580_001 I 0.420
MLOC_60897 Hordeum vulgare MLOC_60897 I 0.420
MTR_4g101660 Medicago truncatula MTR_4g101660 I 0.420
Sb04g033590 Sorghum bicolor Sb04g033590 I 0.420
Si018146m.g Setaria italica Si018146m.g I 0.420
TCM_016030 Theobroma cacao TCM_016030 I 0.420
Traes_2AL_71DE02042 Triticum aestivum Traes_2AL_71DE02042 I 0.420
Traes_2BL_8BEA9CE1B Triticum aestivum Traes_2BL_8BEA9CE1B I 0.420
Traes_6AL_2983D4EB6 Triticum aestivum Traes_6AL_2983D4EB6 I 0.420
Traes_6BL_3F8DB6043 Triticum aestivum Traes_6BL_3F8DB6043 I 0.420
Traes_6DL_59DB06B9F Triticum aestivum Traes_6DL_59DB06B9F I 0.420
TRIUR3_29073 Triticum urartu TRIUR3_29073 I 0.420
VIT_02s0154g00070 Vitis vinifera VIT_02s0154g00070 I 0.420
evm.TU.supercontig_29.121 Carica papaya evm.TU.supercontig_29.121 I 0.420
Gorai.008G236500 Gossypium raimondii Gorai.008G236500 I 0.420
Pavir.Aa01223 Panicum virgatum Pavir.Aa01223 I 0.420
Pavir.Ab02534 Panicum virgatum Pavir.Ab02534 I 0.420
AMTR_s00078p00029420 Amborella trichopoda AMTR_s00078p00029420 I 0.419
BRADI1G57070 Brachypodium distachyon BRADI1G57070 I 0.419
GLYMA06G46560 Glycine max GLYMA06G46560 I 0.419
GLYMA12G10210 Glycine max GLYMA12G10210 I 0.419
GLYMA12G31670 Glycine max GLYMA12G31670 I 0.419
GLYMA13G38750 Glycine max GLYMA13G38750 I 0.419
GRMZM2G106204 Zea mays GRMZM2G106204 I 0.419
GSMUA_Achr5G08930_001 Musa acuminata GSMUA_Achr5G08930_001 I 0.419
LPERR07G03250 Leersia perrieri LPERR07G03250 I 0.419
MTR_2g087740 Medicago truncatula MTR_2g087740 I 0.419
MTR_4g050300 Medicago truncatula MTR_4g050300 I 0.419
OB07G12810 Oryza brachyantha OB07G12810 I 0.419
OMERI07G02330 Oryza meridionalis OMERI07G02330 I 0.419
OPUNC07G03670 Oryza punctata OPUNC07G03670 I 0.419
ORUFI07G03450 Oryza rufipogon ORUFI07G03450 I 0.419
YAB1 Oryza sativa OS07G0160100 I 0.419
PGSC0003DMG400005936 Solanum tuberosum PGSC0003DMG400005936 I 0.419
YAB2 Populus trichocarpa POPTR_0001s22180 I 0.419
PRUPE_ppa011880m2g Prunus persica PRUPE_ppa011880m2g I 0.419
Sb01g013270 Sorghum bicolor Sb01g013270 I 0.419
Sb02g003390 Sorghum bicolor Sb02g003390 I 0.419
Si030811m.g Setaria italica Si030811m.g I 0.419
Si037789m.g Setaria italica Si037789m.g I 0.419
Solyc06g073920.2 Solanum lycopersicum Solyc06g073920.2 I 0.419
Solyc11g071810.1 Solanum lycopersicum Solyc11g071810.1 I 0.419
TCM_041175 Theobroma cacao TCM_041175 I 0.419
Ca_07101 Cicer arietinum Ca_07101 I 0.419
Cla012424 Citrullus lanatus Cla012424 I 0.419
Pm001547 Prunus mume Pm001547 I 0.419
29854.m001136 Ricinus communis 29854.m001136 I 0.419
cassava39022.m1 Manihot esculenta cassava39022.m1 I 0.419
cassava40986.m1 Manihot esculenta cassava40986.m1 I 0.419
Cucsa.295080 Cucumis sativus Cucsa.295080 I 0.419
mgf019496m Mimulus guttatus mgf019496m I 0.419
Aquca_009_00652 Aquilegia coerulea Aquca_009_00652 I 0.419
Bostr.22545s0001 Boechera stricta Bostr.22545s0001 I 0.419
Ciclev10029354m.g Citrus clementina Ciclev10029354m.g I 0.419
Eucgr.C01515 Eucalyptus grandis Eucgr.C01515 I 0.419
Eucgr.J00587 Eucalyptus grandis Eucgr.J00587 I 0.419
evm.TU.supercontig_103.34 Carica papaya evm.TU.supercontig_103.34 I 0.419
Gorai.001G127000 Gossypium raimondii Gorai.001G127000 I 0.419
Gorai.006G117800 Gossypium raimondii Gorai.006G117800 I 0.419
Gorai.007G078500 Gossypium raimondii Gorai.007G078500 N 0.419
MDP0000252640 Malus domestica MDP0000252640 I 0.419
MDP0000331808 Malus domestica MDP0000331808 I 0.419
orange1.1g029862m.g Citrus sinensis orange1.1g029862m.g I 0.419
Pavir.Ba03779 Panicum virgatum Pavir.Ba03779 I 0.419
Pavir.Ia01130 Panicum virgatum Pavir.Ia01130 I 0.419
Pavir.Ib04136 Panicum virgatum Pavir.Ib04136 I 0.419
PK06964.1 Cannabis sativa PK06964.1 I 0.419
gw1.1.1099.1 Micromonas pusilla gw1.1.1099.1 N 0.418
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.416
GPUH_0001196001 Gongylonema pulchrum GPUH_0001196001 N 0.416