mgf021826m (Mimulus guttatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 mgf021826m T285370_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.871 0.848
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.871 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.862 0.870
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.817 0.848
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.817 0.848
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.803 0.848
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.803 0.848
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.803 0.848
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.803 0.848
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.803 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.789 0.848
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.775 0.826
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.775 0.826
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.775 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf021826m Myb 11 56

Links

Other Myb/SANT family TFs
Other Mimulus guttatus TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G33630 Brachypodium distachyon BRADI3G33630 N 0.000
Bra004859 Brassica rapa Bra004859 N 0.000
Bra021072 Brassica rapa Bra021072 N 0.000
MLOC_4400 Hordeum vulgare MLOC_4400 N 0.000
Lus10040141.g Linum usitatissimum Lus10040141.g N 0.000
Lus10000963.g Linum usitatissimum Lus10000963.g N 0.000
mgf005560m Mimulus guttatus mgf005560m N 0.000
OBART10G18780 Oryza barthii OBART10G18780 N 0.000
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N 0.000
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N 0.000
BGIOSGA033455 Oryza indica BGIOSGA033455 N 0.000
OMERI08G00160 Oryza meridionalis OMERI08G00160 N 0.000
OPUNC10G17200 Oryza punctata OPUNC10G17200 N 0.000
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N 0.000
OS10G0564200 Oryza sativa OS10G0564200 N 0.000
Pavir.Ib02309 Panicum virgatum Pavir.Ib02309 N 0.000
Pm029723 Prunus mume Pm029723 N 0.000
PRUPE_ppa021742mg Prunus persica PRUPE_ppa021742mg N 0.000
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.000
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.000
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N 0.000