ORGLA08G0004900 (Oryza glaberrima)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 ORGLA08G0004900 T294808_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.965 0.947
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.928 0.912
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.928 0.912
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.928 0.912
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.917 0.895
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.916 0.886
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.915 0.851
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.905 0.833
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.905 0.833
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA08G0004900.1 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Oryza glaberrima TFs

337 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_022_00269 Aquilegia coerulea Aquca_022_00269 N
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N
NAC104 Arabidopsis thaliana AT5G64530 N
Bo2g166280 Brassica oleracea Bo2g166280 N
Bo3g101220 Brassica oleracea Bo3g101220 N
Bo9g018140 Brassica oleracea Bo9g018140 N
Bra024306 Brassica rapa Bra024306 N
Bra031915 Brassica rapa Bra031915 N
Bra037779 Brassica rapa Bra037779 N
PK12901.1 Cannabis sativa PK12901.1 N
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N
Carubv10027198m.g Capsella rubella Carubv10027198m.g N
evm.TU.supercontig_63.29 Carica papaya evm.TU.supercontig_63.29 N
Ca_05227 Cicer arietinum Ca_05227 N
Cla009592 Citrullus lanatus Cla009592 N
Ciclev10002538m.g Citrus clementina Ciclev10002538m.g N
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N
Cucsa.345830 Cucumis sativus Cucsa.345830 N
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N
Thhalv10004805m.g Eutrema salsugineum Thhalv10004805m.g N
GLYMA05G24910 Glycine max GLYMA05G24910 N
GLYMA06G15990 Glycine max GLYMA06G15990 N
GLYMA08G08010 Glycine max GLYMA08G08010 N
GLYMA08G19300 Glycine max GLYMA08G19300 N
GLYMA15G05690 Glycine max GLYMA15G05690 N
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N
Gorai.005G217400 Gossypium raimondii Gorai.005G217400 N
Gorai.013G063500 Gossypium raimondii Gorai.013G063500 N
Lus10000206.g Linum usitatissimum Lus10000206.g N
Lus10010747.g Linum usitatissimum Lus10010747.g N
Lus10035647.g Linum usitatissimum Lus10035647.g N
Lus10035648.g Linum usitatissimum Lus10035648.g N
chr6.CM0314.510.nd Lotus japonicus chr6.CM0314.510.nd N
chr4.CM0337.760.nc Lotus japonicus chr4.CM0337.760.nc N
MDP0000240094 Malus domestica MDP0000240094 N
MDP0000250487 Malus domestica MDP0000250487 N
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N
MTR_4g094302 Medicago truncatula MTR_4g094302 N
POPTR_0007s04250 Populus trichocarpa POPTR_0007s04250 N
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N
Pm004078 Prunus mume Pm004078 N
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N
29683.m000467 Ricinus communis 29683.m000467 N
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N
TCM_007543 Theobroma cacao TCM_007543 I
ANAC104 Vitis vinifera VIT_12s0055g00510 N
VIT_04s0044g01500 Vitis vinifera VIT_04s0044g01500 N