CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g059300.1
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc03g059300.1
T295831_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g059300.1.1
NAC/NAM
1
126
MGIRFHPTDTKLINYLKRFFKGELSLNQECPILFADIYGDQPPWEIFGANFEVKYRYFITPLKKRRIKDTRFSRTCAKGMWKGQTGEELIRRNSLGPVVGFKRKCRFETSDQCGHNNIWLIIEYQV
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G23060
Brachypodium distachyon
BRADI1G23060
N
MLOC_62665
Hordeum vulgare
MLOC_62665
N
LPERR07G17740
Leersia perrieri
LPERR07G17740
N
GSMUA_Achr4G16460_001
Musa acuminata
GSMUA_Achr4G16460_001
N
GSMUA_Achr8G30950_001
Musa acuminata
GSMUA_Achr8G30950_001
N
OBART07G20430
Oryza barthii
OBART07G20430
N
OB03G31410
Oryza brachyantha
OB03G31410
N
ORGLA07G0156800
Oryza glaberrima
ORGLA07G0156800
N
ORGLA03G0208800
Oryza glaberrima
ORGLA03G0208800
N
OGLUM07G20210
Oryza glumaepatula
OGLUM07G20210
N
OGLUM03G23190
Oryza glumaepatula
OGLUM03G23190
N
SHR2
Oryza indica
BGIOSGA010480
N
SHR1
Oryza indica
BGIOSGA026037
N
OMERI03G20220
Oryza meridionalis
OMERI03G20220
N
OMERI07G17100
Oryza meridionalis
OMERI07G17100
N
ONIVA07G18840
Oryza nivara
ONIVA07G18840
N
ONIVA03G24000
Oryza nivara
ONIVA03G24000
N
OPUNC03G21050
Oryza punctata
OPUNC03G21050
N
OPUNC07G19280
Oryza punctata
OPUNC07G19280
N
ORUFI03G23130
Oryza rufipogon
ORUFI03G23130
N
ORUFI07G21310
Oryza rufipogon
ORUFI07G21310
N
SHR2
Oryza sativa
OS03G0433200
N
SHR1
Oryza sativa
OS07G0586900
N
Pavir.Ba01071
Panicum virgatum
Pavir.Ba01071
N
Pavir.Bb01182
Panicum virgatum
Pavir.Bb01182
N
Pavir.Ia02979
Panicum virgatum
Pavir.Ia02979
N
Si029296m.g
Setaria italica
Si029296m.g
N
Si034653m.g
Setaria italica
Si034653m.g
N
Sb02g037890
Sorghum bicolor
Sb02g037890
N
Traes_2BS_736EF207B1
Triticum aestivum
Traes_2BS_736EF207B1
N
GRMZM2G172657
Zea mays
GRMZM2G172657
N
GRMZM2G132794
Zea mays
GRMZM2G132794
N
GRMZM2G019060
Zea mays
GRMZM2G019060
N