CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm028718
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm028718
T296710_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm028718
NAC/NAM
17
149
LPGFRFYPTEEVLVSYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDVPAFFEEADFPDQEMEWFFFSQPDYKYTNSTRCNRATDQGFYKITGKVREIKAGRSKVVIGKKRTLTFYEGRVPTAKKTNWIMHEYYL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.874
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.952
MDP0000836293
Malus domestica
MDP0000836293
N
0.907
MDP0000688878
Malus domestica
MDP0000688878
N
0.884
MDP0000392668
Malus domestica
MDP0000392668
N
0.932
MDP0000291838
Malus domestica
MDP0000291838
N
0.932
MDP0000249947
Malus domestica
MDP0000249947
N
0.982
MDP0000198108
Malus domestica
MDP0000198108
N
0.969
MDP0000182344
Malus domestica
MDP0000182344
N
0.919
MDP0000138340
Malus domestica
MDP0000138340
N
0.884
MDP0000136652
Malus domestica
MDP0000136652
N
0.919
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.877
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.883
Pm028722
Prunus mume
Pm028722
I
0.901
Pm028721
Prunus mume
Pm028721
N
0.903
Pm028720
Prunus mume
Pm028720
N
0.995
Pm018445
Prunus mume
Pm018445
N
0.904
Pm018442
Prunus mume
Pm018442
N
0.876
PRUPE_ppa026972mg
Prunus persica
PRUPE_ppa026972mg
N
0.991
PRUPE_ppa019865mg
Prunus persica
PRUPE_ppa019865mg
N
0.995
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.949
PRUPE_ppa019241mg
Prunus persica
PRUPE_ppa019241mg
N
0.908