CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000249947
(
Malus domestica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
MDP0000249947
T298477_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000249947
NAC/NAM
27
155
LPGFRFYPTEELLVSHYLRKKIEGTDSHFRHFIPEIDVSKHEPCDLPAFYPDVHEKEWFFFSRPDYKYVNSTRCNRATEQGFYKITGKEREIKAEQSKAVIGKKRTLTFYEGRVPNATKTDWIVHEYYL
Links
Other
NAC/NAM
family TFs
Other
Malus domestica
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm028720
Prunus mume
Pm028720
N
0.986
PRUPE_ppa019865mg
Prunus persica
PRUPE_ppa019865mg
N
0.985
MDP0000198108
Malus domestica
MDP0000198108
N
0.984
Pm028718
Prunus mume
Pm028718
N
0.982
PRUPE_ppa026972mg
Prunus persica
PRUPE_ppa026972mg
N
0.972
MDP0000291838
Malus domestica
MDP0000291838
N
0.968
MDP0000392668
Malus domestica
MDP0000392668
N
0.968
MDP0000136652
Malus domestica
MDP0000136652
N
0.962
MDP0000182344
Malus domestica
MDP0000182344
N
0.962
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.951
Pm028721
Prunus mume
Pm028721
N
0.925
MDP0000138340
Malus domestica
MDP0000138340
N
0.909
MDP0000688878
Malus domestica
MDP0000688878
N
0.909
PRUPE_ppa024568mg
Prunus persica
PRUPE_ppa024568mg
N
0.908
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.901
orange1.1g040419m.g
Citrus sinensis
orange1.1g040419m.g
N
0.901
Pm028722
Prunus mume
Pm028722
I
0.900
PRUPE_ppa019241mg
Prunus persica
PRUPE_ppa019241mg
N
0.897
Pm018442
Prunus mume
Pm018442
N
0.897
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.889
PRUPE_ppa023197mg
Prunus persica
PRUPE_ppa023197mg
N
0.889
Pm018445
Prunus mume
Pm018445
N
0.889
MDP0000836293
Malus domestica
MDP0000836293
N
0.887
PRUPE_ppb017658mg
Prunus persica
PRUPE_ppb017658mg
I
0.879