Carubv10012163m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10012163m.g T297501_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY

RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.973 0.974
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW

WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.943 0.825
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA

TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.940 0.789
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH

DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.928 0.711
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD

HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.928 0.711
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.923 0.789
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.923 0.789
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.904 0.702
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.904 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10012163m NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.13966 Candida albicans CaO19.13966 I 0.000
CaO19.6645 Candida albicans CaO19.6645 I 0.000
orf19.6645 Candida albicans orf19.6645 D 0.000
CD36_31040 Candida dubliniensis CD36_31040 I 0.000
CLUG_02468 Candida lusitaniae CLUG_02468 N 0.000
G210_0850 Candida maltosa G210_0850 I 0.000
CORT_0D04800 Candida orthopsilosis CORT_0D04800 I 0.000
CPAG_04110 Candida parapsilosis CPAG_04110 I 0.000
CANTEDRAFT_115813 Candida tenuis CANTEDRAFT_115813 N 0.000
CTRG_00596 Candida tropicalis CTRG_00596 I 0.000
CLUG_02468 Clavispora lusitaniae CLUG_02468 N 0.000
DEHA2G23694g Debaryomyces hansenii DEHA2G23694g N 0.000
LELG_03232 Lodderomyces elongisporus LELG_03232 N 0.000
PGUG_04087 Meyerozyma guilliermondii PGUG_04087 I 0.000
GNLVRS01_PISO0J18313g Millerozyma farinosa GNLVRS01_PISO0J18313g N 0.000
GNLVRS01_PISO0I16552g Millerozyma farinosa GNLVRS01_PISO0I16552g N 0.000
estExt_fgenesh1_pg.C_chr_2.10534 Pichia stipitis estExt_fgenesh1_pg.C_chr_2.10534 I 0.000
PICST_66957 Scheffersomyces stipitis PICST_66957 I 0.000
SPAPADRAFT_49202 Spathaspora passalidarum SPAPADRAFT_49202 I 0.000