CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPAG_04110
(
Candida parapsilosis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
CPAG_04110
T326033_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
orf19.6645
M11339_2.00
Candida albicans
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HMO1CA_01
0.479
0.594
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPAG_04110.1
Sox
89
162
PKKPLTMFFAFSFHLRKMIAEERKKKGLPNLGAIDLNQLVKDRWDNISDEEKAKWKHKYEEEMKLYNVEKAKYE
Links
Other
Sox
family TFs
Other
Candida parapsilosis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CORT_0D04800
Candida orthopsilosis
CORT_0D04800
I
0.726
SPAPADRAFT_49202
Spathaspora passalidarum
SPAPADRAFT_49202
I
0.540
PICST_66957
Scheffersomyces stipitis
PICST_66957
I
0.489
estExt_fgenesh1_pg.C_chr_2.10534
Pichia stipitis
estExt_fgenesh1_pg.C_chr_2.10534
I
0.489
LELG_03232
Lodderomyces elongisporus
LELG_03232
N
0.488
CaO19.13966
Candida albicans
CaO19.13966
I
0.479
CaO19.6645
Candida albicans
CaO19.6645
I
0.479
CD36_31040
Candida dubliniensis
CD36_31040
I
0.479
orf19.6645
Candida albicans
orf19.6645
D
0.479
G210_0850
Candida maltosa
G210_0850
I
0.477
CTRG_00596
Candida tropicalis
CTRG_00596
I
0.472
CANTEDRAFT_115813
Candida tenuis
CANTEDRAFT_115813
N
0.452
GNLVRS01_PISO0I16552g
Millerozyma farinosa
GNLVRS01_PISO0I16552g
N
0.450
GNLVRS01_PISO0J18313g
Millerozyma farinosa
GNLVRS01_PISO0J18313g
N
0.450
PGUG_04087
Candida guilliermondii
PGUG_04087
I
0.449
PGUG_04087
Meyerozyma guilliermondii
PGUG_04087
I
0.449
DEHA2G23694g
Debaryomyces hansenii
DEHA2G23694g
N
0.422