Carubv10022351m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10022351m.g T297540_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.966 0.974
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.966 0.974
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.918 0.842
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.913 0.842
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.913 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10022351m NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07224 Aegilops tauschii F775_07224 I 0.894
F775_08057 Aegilops tauschii F775_08057 I 0.902
F775_20020 Aegilops tauschii F775_20020 I 0.910
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.950
AMTR_s00068p00207380 Amborella trichopoda AMTR_s00068p00207380 I 0.892
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.909
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.932
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.916
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.966
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I 0.972
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.913
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.874
NAC007 Arabidopsis thaliana AT1G12260 D 0.966
NAC026 Arabidopsis thaliana AT1G62700 I 0.945
NAC037 Arabidopsis thaliana AT2G18060 D 0.918
ANAC076 Arabidopsis thaliana AT4G36160 D 0.913
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.874
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.966
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.903
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.972
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I 0.902
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I 0.894
BRADI3G50067 Brachypodium distachyon BRADI3G50067 I 0.902
BRADI5G16917 Brachypodium distachyon BRADI5G16917 N 0.871
Bo1g005810 Brassica oleracea Bo1g005810 I 0.912
Bo3g093950 Brassica oleracea Bo3g093950 I 0.920
Bo5g017120 Brassica oleracea Bo5g017120 I 0.961
Bo7g011640 Brassica oleracea Bo7g011640 I 0.920
Bo7g065010 Brassica oleracea Bo7g065010 I 0.874
Bo7g117820 Brassica oleracea Bo7g117820 I 0.913
Bo8g062650 Brassica oleracea Bo8g062650 I 0.966
Bo8g108300 Brassica oleracea Bo8g108300 I 0.963
Bra011667 Brassica rapa Bra011667 I 0.912
Bra012065 Brassica rapa Bra012065 I 0.874
Bra016783 Brassica rapa Bra016783 I 0.966
Bra017750 Brassica rapa Bra017750 I 0.913
Bra019750 Brassica rapa Bra019750 I 0.960
Bra026981 Brassica rapa Bra026981 I 0.963
Bra027024 Brassica rapa Bra027024 I 0.942
Bra039915 Brassica rapa Bra039915 I 0.931
PK11173.1 Cannabis sativa PK11173.1 I 0.915
PK23416.1 Cannabis sativa PK23416.1 I 0.951
PK28510.1 Cannabis sativa PK28510.1 I 0.939
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.966
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.874
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.974
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.913
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.913
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.966
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.874
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.964
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.925
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.921
Ca_01981 Cicer arietinum Ca_01981 I 0.885
Ca_02365 Cicer arietinum Ca_02365 I 0.941
Ca_08693 Cicer arietinum Ca_08693 I 0.930
Cla005768 Citrullus lanatus Cla005768 I 0.937
Cla006372 Citrullus lanatus Cla006372 I 0.935
Cla011742 Citrullus lanatus Cla011742 I 0.926
Cla014492 Citrullus lanatus Cla014492 I 0.909
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.936
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.953
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.921
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.936
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.953
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.921
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.921
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.935
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.955
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.951
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.936
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.917
Thhalv10005380m.g Eutrema salsugineum Thhalv10005380m.g I 0.874
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.966
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.924
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.945
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I 0.910
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.903
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.938
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.943
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.885
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.878
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.922
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.943
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.932
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.927
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.939
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.885
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.928
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.872
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.943
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.936
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.918
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I 0.915
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.936
Gorai.004G201100 Gossypium raimondii Gorai.004G201100 I 0.924
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.876
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.922
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.918
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.935
MLOC_15746 Hordeum vulgare MLOC_15746 I 0.887
MLOC_53086 Hordeum vulgare MLOC_53086 I 0.894
MLOC_56103 Hordeum vulgare MLOC_56103 I 0.906
MLOC_56769 Hordeum vulgare MLOC_56769 I 0.912
LPERR02G21010 Leersia perrieri LPERR02G21010 I 0.905
LPERR03G01990 Leersia perrieri LPERR03G01990 I 0.914
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.929
LPERR06G00240 Leersia perrieri LPERR06G00240 I 0.876
Lus10004338.g Linum usitatissimum Lus10004338.g I 0.892
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.950
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.911
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.939
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.939
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.941
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.911
LjSGA_013013.1 Lotus japonicus LjSGA_013013.1 I 0.933
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.934
MDP0000131126 Malus domestica MDP0000131126 I 0.913
MDP0000136180 Malus domestica MDP0000136180 I 0.907
MDP0000176447 Malus domestica MDP0000176447 I 0.907
MDP0000221977 Malus domestica MDP0000221977 I 0.913
MDP0000226701 Malus domestica MDP0000226701 I 0.922
MDP0000246470 Malus domestica MDP0000246470 I 0.924
MDP0000254112 Malus domestica MDP0000254112 I 0.924
MDP0000298965 Malus domestica MDP0000298965 I 0.907
MDP0000299959 Malus domestica MDP0000299959 I 0.907
MDP0000320566 Malus domestica MDP0000320566 I 0.923
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.921
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.917
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.948
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.936
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.924
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.943
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.939
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.880
mgf002365m Mimulus guttatus mgf002365m I 0.877
mgf020336m Mimulus guttatus mgf020336m I 0.947
mgf021916m Mimulus guttatus mgf021916m I 0.933
mgf022574m Mimulus guttatus mgf022574m I 0.918
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.920
GSMUA_Achr11G03780_001 Musa acuminata GSMUA_Achr11G03780_001 I 0.891
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.917
GSMUA_Achr7G06640_001 Musa acuminata GSMUA_Achr7G06640_001 I 0.901
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I 0.913
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.920
OBART02G25700 Oryza barthii OBART02G25700 I 0.905
OBART03G02180 Oryza barthii OBART03G02180 I 0.914
OBART04G20020 Oryza barthii OBART04G20020 I 0.929
OBART06G00240 Oryza barthii OBART06G00240 I 0.872
OBART10G16620 Oryza barthii OBART10G16620 I 0.894
OB02G33070 Oryza brachyantha OB02G33070 I 0.905
OB03G12100 Oryza brachyantha OB03G12100 I 0.914
OB04G27030 Oryza brachyantha OB04G27030 I 0.929
OB06G10310 Oryza brachyantha OB06G10310 I 0.872
OB10G23740 Oryza brachyantha OB10G23740 I 0.913
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I 0.914
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.929
ORGLA06G0002300 Oryza glaberrima ORGLA06G0002300 I 0.872
OGLUM02G26220 Oryza glumaepatula OGLUM02G26220 I 0.905
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I 0.914
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.929
OGLUM06G00210 Oryza glumaepatula OGLUM06G00210 I 0.872
OGLUM10G16690 Oryza glumaepatula OGLUM10G16690 I 0.894
BGIOSGA005950 Oryza indica BGIOSGA005950 I 0.896
BGIOSGA011539 Oryza indica BGIOSGA011539 I 0.914
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.929
BGIOSGA022108 Oryza indica BGIOSGA022108 I 0.872
BGIOSGA033343 Oryza indica BGIOSGA033343 I 0.913
OLONG_011521 Oryza longistaminata OLONG_011521 I 0.914
OLONG_016152 Oryza longistaminata OLONG_016152 I 0.905
OLONG_018618 Oryza longistaminata OLONG_018618 I 0.892
OMERI02G25220 Oryza meridionalis OMERI02G25220 I 0.905
OMERI03G02020 Oryza meridionalis OMERI03G02020 I 0.914
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.929
OMERI06G00230 Oryza meridionalis OMERI06G00230 I 0.872
OMERI10G13220 Oryza meridionalis OMERI10G13220 I 0.905
ONIVA02G28150 Oryza nivara ONIVA02G28150 I 0.905
ONIVA03G01790 Oryza nivara ONIVA03G01790 I 0.914
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.929
ONIVA06G00260 Oryza nivara ONIVA06G00260 I 0.872
ONIVA10G18400 Oryza nivara ONIVA10G18400 I 0.894
OPUNC02G23550 Oryza punctata OPUNC02G23550 I 0.900
OPUNC03G01920 Oryza punctata OPUNC03G01920 I 0.914
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.929
OPUNC06G00220 Oryza punctata OPUNC06G00220 I 0.872
ORUFI02G27110 Oryza rufipogon ORUFI02G27110 I 0.905
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I 0.914
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.929
ORUFI06G00250 Oryza rufipogon ORUFI06G00250 I 0.872
ORUFI10G17730 Oryza rufipogon ORUFI10G17730 I 0.894
OS02G0643600 Oryza sativa OS02G0643600 I 0.905
OS04G0536500 Oryza sativa OS04G0536500 I 0.929
OS06G0104200 Oryza sativa OS06G0104200 I 0.872
OS10G0532000 Oryza sativa OS10G0532000 I 0.913
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I 0.903
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.932
Pavir.Ia02924 Panicum virgatum Pavir.Ia02924 I 0.901
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I 0.912
Pavir.Ib02477 Panicum virgatum Pavir.Ib02477 I 0.901
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.932
Pavir.J26987 Panicum virgatum Pavir.J26987 I 0.903
Pavir.J32898 Panicum virgatum Pavir.J32898 I 0.910
Pavir.J39804 Panicum virgatum Pavir.J39804 I 0.892
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.922
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I 0.886
e_gw1.201.156.1 Physcomitrella patens e_gw1.201.156.1 I 0.901
estExt_gwp_gw1.C_2230002 Physcomitrella patens estExt_gwp_gw1.C_2230002 N 0.890
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.951
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.951
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.921
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.939
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.938
Pm019488 Prunus mume Pm019488 I 0.938
Pm019490 Prunus mume Pm019490 I 0.938
Pm023559 Prunus mume Pm023559 I 0.938
Pm026735 Prunus mume Pm026735 I 0.907
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.938
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.938
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.907
28200.m000189 Ricinus communis 28200.m000189 I 0.951
28623.m000400 Ricinus communis 28623.m000400 I 0.918
30147.m014211 Ricinus communis 30147.m014211 I 0.938
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.938
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.907
SapurV1A.0367s0210 Salix purpurea SapurV1A.0367s0210 I 0.932
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.921
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.949
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.951
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.907
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I 0.921
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.898
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.898
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I 0.921
Si006829m.g Setaria italica Si006829m.g I 0.899
Si010504m.g Setaria italica Si010504m.g I 0.932
Si017679m.g Setaria italica Si017679m.g I 0.892
Si036363m.g Setaria italica Si036363m.g I 0.912
Si039467m.g Setaria italica Si039467m.g I 0.902
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.914
Solyc03g083880.2 Solanum lycopersicum Solyc03g083880.2 I 0.881
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.935
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.915
PGSC0003DMG400004740 Solanum tuberosum PGSC0003DMG400004740 I 0.899
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.935
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.914
Sb01g030760 Sorghum bicolor Sb01g030760 I 0.903
Sb01g048730 Sorghum bicolor Sb01g048730 I 0.912
Sb04g033570 Sorghum bicolor Sb04g033570 I 0.884
Sb06g023780 Sorghum bicolor Sb06g023780 I 0.901
Sb10g000460 Sorghum bicolor Sb10g000460 I 0.903
TCM_000235 Theobroma cacao TCM_000235 I 0.921
TCM_014939 Theobroma cacao TCM_014939 I 0.936
TCM_016035 Theobroma cacao TCM_016035 I 0.951
Traes_2AL_82C3E7E14 Triticum aestivum Traes_2AL_82C3E7E14 I 0.887
Traes_2BL_24E6E8DF9 Triticum aestivum Traes_2BL_24E6E8DF9 I 0.887
Traes_2DL_343FA6101 Triticum aestivum Traes_2DL_343FA6101 I 0.885
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I 0.894
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I 0.910
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I 0.910
Traes_6AL_BB7207AD1 Triticum aestivum Traes_6AL_BB7207AD1 I 0.902
Traes_6BL_8F77BF933 Triticum aestivum Traes_6BL_8F77BF933 I 0.902
Traes_6DL_D0BE06357 Triticum aestivum Traes_6DL_D0BE06357 I 0.902
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I 0.894
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I 0.894
TRIUR3_08851 Triticum urartu TRIUR3_08851 I 0.894
TRIUR3_20707 Triticum urartu TRIUR3_20707 I 0.902
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.948
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.921
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.938
GRMZM2G025642 Zea mays GRMZM2G025642 I 0.889
GRMZM2G041668 Zea mays GRMZM2G041668 I 0.899
GRMZM2G178998 Zea mays GRMZM2G178998 I 0.914
GRMZM2G315140 Zea mays GRMZM2G315140 I 0.892
GRMZM2G354151 Zea mays GRMZM2G354151 I 0.895
GRMZM2G440219 Zea mays GRMZM2G440219 I 0.899