CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_4.138
(
Carica papaya
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
evm.TU.supercontig_4.138
T297873_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_4.138
NAC/NAM
15
146
PPGFRFQPTDEELVFRYLKCKVFSFPLPASIIPDVNLCKYDPWDLPGELEQERYFFSSKEAKYRNGNRINRATVSGYWKATGSDRQISSPRKNQMVGMKKTLVFYKGKPPHGFRTSWNVLSEMEKWVICHVY
Links
Other
NAC/NAM
family TFs
Other
Carica papaya
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g009040
Brassica oleracea
Bo3g009040
I
0.881
Bo4g181990
Brassica oleracea
Bo4g181990
I
0.886
Bo9g168950
Brassica oleracea
Bo9g168950
I
0.877
Bo2g011120
Brassica oleracea
Bo2g011120
I
0.885
Bra006186
Brassica rapa
Bra006186
I
0.877
Bra008849
Brassica rapa
Bra008849
I
0.885
Bra021856
Brassica rapa
Bra021856
I
0.886
Bra023395
Brassica rapa
Bra023395
I
0.873
Eucgr.B03537
Eucalyptus grandis
Eucgr.B03537
I
0.878
Thhalv10014495m.g
Eutrema salsugineum
Thhalv10014495m.g
I
0.876
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.885
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.884
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.884
Gorai.007G043900
Gossypium raimondii
Gorai.007G043900
N
0.908
Gorai.005G195300
Gossypium raimondii
Gorai.005G195300
I
0.872
Lus10002581.g
Linum usitatissimum
Lus10002581.g
I
0.884
Lus10001809.g
Linum usitatissimum
Lus10001809.g
I
0.881
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.871
MDP0000130686
Malus domestica
MDP0000130686
N
0.874
cassava37235.valid.m1
Manihot esculenta
cassava37235.valid.m1
N
0.876
MTR_7g005280
Medicago truncatula
MTR_7g005280
I
0.881
GSMUA_Achr10G11910_001
Musa acuminata
GSMUA_Achr10G11910_001
N
0.877
POPTR_0015s11420
Populus trichocarpa
POPTR_0015s11420
N
0.877
POPTR_0012s10530
Populus trichocarpa
POPTR_0012s10530
N
0.873
30147.m014441
Ricinus communis
30147.m014441
N
0.926
SapurV1A.0614s0190
Salix purpurea
SapurV1A.0614s0190
N
0.907
SapurV1A.1562s0030
Salix purpurea
SapurV1A.1562s0030
N
0.874
SapurV1A.1562s0040
Salix purpurea
SapurV1A.1562s0040
N
0.874
SapurV1A.1580s0010
Salix purpurea
SapurV1A.1580s0010
N
0.907
TCM_014713
Theobroma cacao
TCM_014713
I
0.928
VIT_17s0000g00770
Vitis vinifera
VIT_17s0000g00770
N
0.892