CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0063s0610
(
Salix purpurea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
SapurV1A.0063s0610
T299038_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.909
0.838
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.909
0.838
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.909
0.838
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.909
0.838
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0063s0610.1.p
NAC/NAM
11
135
PPGFRFHPTDEELIVYYLRNQATSRPCPASIIPEFDIYKFDPWQLPEKAEFGENEWYFFTPLDRKYPNGVRPNRATVSGYWKATGTDKAIHSGSKYVGVKKALVFYKGRPPKGTKTDWIMQEYRL
Links
Other
NAC/NAM
family TFs
Other
Salix purpurea
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_013_00290
Aquilegia coerulea
Aquca_013_00290
N
PK09701.1
Cannabis sativa
PK09701.1
N
evm.TU.supercontig_107.76
Carica papaya
evm.TU.supercontig_107.76
N
gene13234-v1.0-hybrid
Fragaria vesca
gene13234-v1.0-hybrid
N
GLYMA10G37780
Glycine max
GLYMA10G37780
N
Gorai.004G117900
Gossypium raimondii
Gorai.004G117900
N
Gorai.008G275600
Gossypium raimondii
Gorai.008G275600
N
MDP0000157870
Malus domestica
MDP0000157870
N
MDP0000291317
Malus domestica
MDP0000291317
N
MDP0000905888
Malus domestica
MDP0000905888
N
cassava18962.valid.m1
Manihot esculenta
cassava18962.valid.m1
N
mgf002951m
Mimulus guttatus
mgf002951m
N
GSMUA_Achr1G03120_001
Musa acuminata
GSMUA_Achr1G03120_001
N
OBART09G20240
Oryza barthii
OBART09G20240
N
ORGLA09G0165100
Oryza glaberrima
ORGLA09G0165100
N
OGLUM09G20980
Oryza glumaepatula
OGLUM09G20980
N
BGIOSGA031305
Oryza indica
BGIOSGA031305
N
OMERI01G25790
Oryza meridionalis
OMERI01G25790
N
ONIVA03G00390
Oryza nivara
ONIVA03G00390
N
OPUNC09G18580
Oryza punctata
OPUNC09G18580
N
ORUFI09G21860
Oryza rufipogon
ORUFI09G21860
N
OS09G0570200
Oryza sativa
OS09G0570200
N
Pm019310
Prunus mume
Pm019310
N
PRUPE_ppa002336mg
Prunus persica
PRUPE_ppa002336mg
N
30169.m006244
Ricinus communis
30169.m006244
N
TCM_015200
Theobroma cacao
TCM_015200
N
VIT_16s0050g00700
Vitis vinifera
VIT_16s0050g00700
N
GRMZM2G142502
Zea mays
GRMZM2G142502
N
AC234522.1_FG009
Zea mays
AC234522.1_FG009
N