CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN19580
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN19580
T301804_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN19580
Nuclear receptor
13
82
HVCLVCQDFASGYHYGVPSCVGCKTFFRRTIMKKQKYICQFEGNCPVDKTIRCACRYCRFEKCISVGMDK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.802
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.802
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.799
ASU_12501
Ascaris suum
ASU_12501
I
0.799
CBN03435
Caenorhabditis brenneri
CBN03435
N
0.993
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.807
CBN30215
Caenorhabditis brenneri
CBN30215
I
0.929
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.807
CBG23318
Caenorhabditis briggsae
CBG23318
I
0.944
CBG23319
Caenorhabditis briggsae
CBG23319
I
0.839
CBG01439
Caenorhabditis briggsae
CBG01439
N
0.985
nhr-101
Caenorhabditis elegans
WBGene00003691
I
0.839
nhr-114
Caenorhabditis elegans
WBGene00003704
N
0.993
nhr-68
Caenorhabditis elegans
WBGene00003658
I
0.944
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.821
CJA37776
Caenorhabditis japonica
CJA37776
I
0.818
CJA01292
Caenorhabditis japonica
CJA01292
I
0.788
CRE26982
Caenorhabditis remanei
CRE26982
I
0.942
CRE26981
Caenorhabditis remanei
CRE26981
I
0.841
CRE25378
Caenorhabditis remanei
CRE25378
I
0.809
CRE09267
Caenorhabditis remanei
CRE09267
I
0.992
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.784
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.784
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.770
NECAME_00872
Necator americanus
NECAME_00872
I
0.799
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.805
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.795
L893_g25227
Steinernema glaseri
L893_g25227
I
0.795
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.799
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.772
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.799