DAPPUDRAFT_220366 (Daphnia pulex)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 DAPPUDRAFT_220366 T302329_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr4a2
M00818_2.00 		Mus musculus
AAAGGTCA
TGACCTTT		 PBM
Weirauch et al.(2013)
pTH3467 		0.990 0.886
NR4A2
M03383_2.00 		Homo sapiens
AGGTCAHNNNDTGACCT
AGGTCAHNNNDTGACCT		 SELEX
Jolma et al.(2013)
NR4A2_1 		0.990 0.886
NR4A2
M03384_2.00 		Homo sapiens
TGACCTTTAAAGGTCA
TGACCTTTAAAGGTCA		 SELEX
Jolma et al.(2013)
NR4A2_2 		0.990 0.886
NR4A2
M03385_2.00 		Homo sapiens
NBTAAAGGTCA
TGACCTTTAVN		 SELEX
Jolma et al.(2013)
NR4A2_3 		0.990 0.886
NR4A2
M05639_2.00 		Homo sapiens
NWAAKGTCAN
NTGACMTTWN		 SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX 		0.990 0.886
NR4A2
M05881_2.00 		Homo sapiens
NAAAKGTYA
TRACMTTTN		 SMiLE-seq
Isakova et al.(2017)
NR4A2 		0.990 0.886
NR4A2
M09286_2.00 		Homo sapiens
RAAGGTCAV
BTGACCTTY		 Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C 		0.990 0.886
Nr4a2
M09323_2.00 		Mus musculus
RAAGGTCAV
BTGACCTTY		 Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C 		0.990 0.886
NR4A2
M11151_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NURR1_Q3_01 		0.990 0.886
NR4A2
M11152_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NURR1_Q3 		0.990 0.886
NR4A2
M08461_2.00 		Homo sapiens
RAGGTCAM
KTGACCTY		 COMPILED
Mathelier et al.(2014)
MA0160.1 		0.990 0.886
NR4A2
M05640_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX 		0.990 0.886
Hr38
M03939_2.00 		Drosophila melanogaster
NAAAGGTCA
TGACCTTTN		 SELEX
Nitta et al.(2015)
Hr38_1 		0.987 0.943
NR4A1
M05601_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1 		0.987 0.857
NR4A1
M05602_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2 		0.987 0.857
NR4A1
M08153_2.00 		Homo sapiens
NAAAGGTCAN
NTGACCTTTN		 ChIP-seq
Mathelier et al.(2014)
MA1112.1 		0.987 0.857
NR4A1
M09274_2.00 		Homo sapiens
AAAKGBCAN
NTGVCMTTT		 Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A 		0.987 0.857
Nr4a1
M09317_2.00 		Mus musculus
NRAADGKCA
TGMCHTTYN		 Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B 		0.987 0.857
NR4A1
M09608_2.00 		Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN		 Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363 		0.987 0.857
NR4A1
M11132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_01 		0.987 0.857
NR4A1
M11133_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5_02 		0.987 0.857
NR4A1
M11134_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NUR77_Q5 		0.987 0.857
NR4A1
M05603_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1 		0.987 0.857
NR4A1
M05604_2.00 		Homo sapiens
NAAAGGTCRN
NYGACCTTTN		 SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2 		0.987 0.857
nhr-6
M01298_2.00 		Caenorhabditis elegans
AAAKGTCA
TGACMTTT		 PBM
Lambert et al.(2019)
pTH9944 		0.947 0.714
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.848 0.571
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.824 0.614
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.824 0.614
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.824 0.614
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.824 0.614
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.824 0.614
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.824 0.614
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.820 0.614
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.812 0.600
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.812 0.600
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.812 0.600
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.812 0.600
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.812 0.600
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.812 0.600
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.812 0.600
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.812 0.600
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.812 0.600
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.809 0.529
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.809 0.529
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.809 0.529
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.808 0.586
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.808 0.586
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.808 0.586
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.808 0.586
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.808 0.586
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.808 0.586
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.808 0.586
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.808 0.586
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.808 0.586
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.808 0.586
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.808 0.586
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.808 0.586
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.808 0.586
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.808 0.586
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.808 0.586
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.802 0.571
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.802 0.571
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.802 0.571
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.802 0.571
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.802 0.571
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.802 0.571
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.802 0.571
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.802 0.571
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.802 0.571
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.802 0.571
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.802 0.571
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.802 0.571
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.802 0.571
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.749 0.529
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.749 0.529
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.749 0.529
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.749 0.529
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.749 0.529
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.749 0.529
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.749 0.529
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.749 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX89235 Nuclear receptor 97 166

Links

Other Nuclear receptor family TFs
Other Daphnia pulex TFs

887 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07647 Aegilops tauschii F775_07647 N
F775_09086 Aegilops tauschii F775_09086 N
AMTR_s00004p00174960 Amborella trichopoda AMTR_s00004p00174960 N
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N
Aquca_014_00766 Aquilegia coerulea Aquca_014_00766 N
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N
Al_scaffold_0481_2 Arabidopsis lyrata Al_scaffold_0481_2 N
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N
fgenesh2_kg.4__1496__AT2G34720.1 Arabidopsis lyrata fgenesh2_kg.4__1496__AT2G34720.1 N
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N
NFYA4 Arabidopsis thaliana AT2G34720 N
UNE8 Arabidopsis thaliana AT3G05690 N
NFYA10 Arabidopsis thaliana AT5G06510 N
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N
Bostr.23794s0634 Boechera stricta Bostr.23794s0634 N
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I
BRADI1G13680 Brachypodium distachyon BRADI1G13680 N
BRADI4G01380 Brachypodium distachyon BRADI4G01380 N
Bo1g150420 Brassica oleracea Bo1g150420 N
Bo3g060160 Brassica oleracea Bo3g060160 N
Bo4g039370 Brassica oleracea Bo4g039370 N
Bo5g063060 Brassica oleracea Bo5g063060 N
Bo5g145140 Brassica oleracea Bo5g145140 N
Bo9g176100 Brassica oleracea Bo9g176100 N
Bra001164 Brassica rapa Bra001164 N
Bra005397 Brassica rapa Bra005397 N
Bra009200 Brassica rapa Bra009200 N
Bra032395 Brassica rapa Bra032395 N
Bra040529 Brassica rapa Bra040529 N
PK00926.1 Cannabis sativa PK00926.1 N
PK11147.1 Cannabis sativa PK11147.1 I
PK20005.1 Cannabis sativa PK20005.1 N
PK21261.1 Cannabis sativa PK21261.1 I
PK26326.1 Cannabis sativa PK26326.1 N
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N
Cagra.3346s0024 Capsella grandiflora Cagra.3346s0024 N
Carubv10001713m.g Capsella rubella Carubv10001713m.g N
Carubv10010359m.g Capsella rubella Carubv10010359m.g N
Carubv10014086m.g Capsella rubella Carubv10014086m.g N
Carubv10024092m.g Capsella rubella Carubv10024092m.g N
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N
evm.TU.supercontig_125.6 Carica papaya evm.TU.supercontig_125.6 I
evm.TU.supercontig_20.45 Carica papaya evm.TU.supercontig_20.45 N
Ca_00866 Cicer arietinum Ca_00866 N
Ca_07995 Cicer arietinum Ca_07995 N
Ca_11593 Cicer arietinum Ca_11593 N
Ca_14455 Cicer arietinum Ca_14455 N
Ca_20250 Cicer arietinum Ca_20250 N
Cla000845 Citrullus lanatus Cla000845 N
Cla009990 Citrullus lanatus Cla009990 N
Cla015490 Citrullus lanatus Cla015490 I
Cla017115 Citrullus lanatus Cla017115 N
Cla017884 Citrullus lanatus Cla017884 N
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N
Ciclev10032207m.g Citrus clementina Ciclev10032207m.g N
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N
Cucsa.048230 Cucumis sativus Cucsa.048230 N
Cucsa.127910 Cucumis sativus Cucsa.127910 I
Cucsa.241980 Cucumis sativus Cucsa.241980 N
Cucsa.374630 Cucumis sativus Cucsa.374630 I
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N
Eucgr.F03169 Eucalyptus grandis Eucgr.F03169 I
Eucgr.G03377 Eucalyptus grandis Eucgr.G03377 N
Eucgr.K01943 Eucalyptus grandis Eucgr.K01943 N
Thhalv10009032m.g Eutrema salsugineum Thhalv10009032m.g N
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N
Thhalv10017261m.g Eutrema salsugineum Thhalv10017261m.g N
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N
gene12709-v1.0-hybrid Fragaria vesca gene12709-v1.0-hybrid N
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N
gene26819-v1.0-hybrid Fragaria vesca gene26819-v1.0-hybrid N
gene28941-v1.0-hybrid Fragaria vesca gene28941-v1.0-hybrid N
GLYMA02G35190 Glycine max GLYMA02G35190 N
GLYMA03G36140 Glycine max GLYMA03G36140 N
GLYMA05G29970 Glycine max GLYMA05G29970 N
GLYMA08G13090 Glycine max GLYMA08G13090 N
GLYMA09G02770 Glycine max GLYMA09G02770 N
GLYMA09G07960 Glycine max GLYMA09G07960 I
GLYMA10G10240 Glycine max GLYMA10G10240 N
GLYMA12G36540 Glycine max GLYMA12G36540 I
GLYMA13G16770 Glycine max GLYMA13G16770 N
GLYMA13G27230 Glycine max GLYMA13G27230 I
GLYMA15G13660 Glycine max GLYMA15G13660 N
GLYMA15G18970 Glycine max GLYMA15G18970 I
GLYMA17G05920 Glycine max GLYMA17G05920 I
GLYMA19G38800 Glycine max GLYMA19G38800 N
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I
Gorai.004G172100 Gossypium raimondii Gorai.004G172100 I
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N
Gorai.011G004400 Gossypium raimondii Gorai.011G004400 N
MLOC_76757 Hordeum vulgare MLOC_76757 N
LPERR03G22840 Leersia perrieri LPERR03G22840 N
LPERR03G25340 Leersia perrieri LPERR03G25340 I
LPERR07G03140 Leersia perrieri LPERR07G03140 N
LPERR08G05240 Leersia perrieri LPERR08G05240 N
LPERR12G16030 Leersia perrieri LPERR12G16030 N
Lus10009944.g Linum usitatissimum Lus10009944.g I
Lus10011326.g Linum usitatissimum Lus10011326.g I
Lus10012202.g Linum usitatissimum Lus10012202.g I
Lus10013592.g Linum usitatissimum Lus10013592.g N
Lus10021259.g Linum usitatissimum Lus10021259.g N
Lus10023358.g Linum usitatissimum Lus10023358.g N
Lus10030137.g Linum usitatissimum Lus10030137.g I
Lus10038448.g Linum usitatissimum Lus10038448.g N
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N
MDP0000129029 Malus domestica MDP0000129029 N
MDP0000223651 Malus domestica MDP0000223651 N
MDP0000278621 Malus domestica MDP0000278621 N
MDP0000279028 Malus domestica MDP0000279028 N
MDP0000375005 Malus domestica MDP0000375005 N
MDP0000506954 Malus domestica MDP0000506954 N
MDP0000588222 Malus domestica MDP0000588222 N
MDP0000682805 Malus domestica MDP0000682805 N
MDP0000785523 Malus domestica MDP0000785523 N
cassava24161.valid.m1 Manihot esculenta cassava24161.valid.m1 N
cassava24247.valid.m1 Manihot esculenta cassava24247.valid.m1 N
cassava29667.valid.m1 Manihot esculenta cassava29667.valid.m1 I
cassava31873.valid.m1 Manihot esculenta cassava31873.valid.m1 N
cassava31874.valid.m1 Manihot esculenta cassava31874.valid.m1 N
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I
cassava41983.valid.m1 Manihot esculenta cassava41983.valid.m1 N
MTR_1g056530 Medicago truncatula MTR_1g056530 N
MTR_2g030170 Medicago truncatula MTR_2g030170 N
MTR_2g041090 Medicago truncatula MTR_2g041090 N
MTR_7g106450 Medicago truncatula MTR_7g106450 N
MTR_8g037270 Medicago truncatula MTR_8g037270 N
EuGene.0000150165 Micromonas pusilla EuGene.0000150165 N
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N
mg014677m Mimulus guttatus mg014677m N
mgf012950m Mimulus guttatus mgf012950m I
mgf016940m Mimulus guttatus mgf016940m N
mgf025421m Mimulus guttatus mgf025421m N
GSMUA_Achr3G29730_001 Musa acuminata GSMUA_Achr3G29730_001 N
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N
GSMUA_Achr4G11090_001 Musa acuminata GSMUA_Achr4G11090_001 I
GSMUA_Achr4G31420_001 Musa acuminata GSMUA_Achr4G31420_001 N
GSMUA_Achr4G31650_001 Musa acuminata GSMUA_Achr4G31650_001 N
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N
OBART02G34510 Oryza barthii OBART02G34510 I
OBART03G30600 Oryza barthii OBART03G30600 I
OBART08G05580 Oryza barthii OBART08G05580 N
OBART12G19060 Oryza barthii OBART12G19060 N
OB03G35340 Oryza brachyantha OB03G35340 N
OB03G37700 Oryza brachyantha OB03G37700 I
OB08G15650 Oryza brachyantha OB08G15650 N
OB12G25960 Oryza brachyantha OB12G25960 N
ORGLA02G0298500 Oryza glaberrima ORGLA02G0298500 I
ORGLA03G0280400 Oryza glaberrima ORGLA03G0280400 I
ORGLA07G0030900 Oryza glaberrima ORGLA07G0030900 N
ORGLA08G0048400 Oryza glaberrima ORGLA08G0048400 N
ORGLA12G0163500 Oryza glaberrima ORGLA12G0163500 N
OGLUM03G28230 Oryza glumaepatula OGLUM03G28230 N
OGLUM03G30810 Oryza glumaepatula OGLUM03G30810 I
OGLUM07G02990 Oryza glumaepatula OGLUM07G02990 N
OGLUM08G05950 Oryza glumaepatula OGLUM08G05950 N
OGLUM12G20730 Oryza glumaepatula OGLUM12G20730 N
BGIOSGA010142 Oryza indica BGIOSGA010142 N
BGIOSGA013378 Oryza indica BGIOSGA013378 I
BGIOSGA024793 Oryza indica BGIOSGA024793 N
BGIOSGA028138 Oryza indica BGIOSGA028138 N
BGIOSGA035818 Oryza indica BGIOSGA035818 N
OLONG_002491 Oryza longistaminata OLONG_002491 N
OLONG_018144 Oryza longistaminata OLONG_018144 N
OMERI02G32760 Oryza meridionalis OMERI02G32760 I
OMERI03G24480 Oryza meridionalis OMERI03G24480 N
OMERI03G26770 Oryza meridionalis OMERI03G26770 I
OMERI07G18960 Oryza meridionalis OMERI07G18960 N
OMERI08G05500 Oryza meridionalis OMERI08G05500 N
OMERI12G13600 Oryza meridionalis OMERI12G13600 N
ONIVA02G36550 Oryza nivara ONIVA02G36550 I
ONIVA03G28530 Oryza nivara ONIVA03G28530 N
ONIVA03G31950 Oryza nivara ONIVA03G31950 I
ONIVA07G02150 Oryza nivara ONIVA07G02150 N
ONIVA08G05590 Oryza nivara ONIVA08G05590 N
ONIVA12G18060 Oryza nivara ONIVA12G18060 N
OPUNC02G31840 Oryza punctata OPUNC02G31840 I
OPUNC03G25190 Oryza punctata OPUNC03G25190 N
OPUNC03G27900 Oryza punctata OPUNC03G27900 I
OPUNC07G03530 Oryza punctata OPUNC07G03530 N
OPUNC08G05330 Oryza punctata OPUNC08G05330 N
OPUNC12G17240 Oryza punctata OPUNC12G17240 N
ORUFI03G28690 Oryza rufipogon ORUFI03G28690 N
ORUFI03G31840 Oryza rufipogon ORUFI03G31840 I
ORUFI07G03340 Oryza rufipogon ORUFI07G03340 N
ORUFI08G06250 Oryza rufipogon ORUFI08G06250 N
ORUFI12G21270 Oryza rufipogon ORUFI12G21270 N
OS02G0776400 Oryza sativa OS02G0776400 I
OS03G0647600 Oryza sativa OS03G0647600 N
OS03G0696300 Oryza sativa OS03G0696300 I
OS07G0158500 Oryza sativa OS07G0158500 N
OS08G0196700 Oryza sativa OS08G0196700 N
OS12G0618600 Oryza sativa OS12G0618600 N
Pavir.Cb00052 Panicum virgatum Pavir.Cb00052 N
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I
Pavir.Ia01146 Panicum virgatum Pavir.Ia01146 N
Pavir.Ib04124 Panicum virgatum Pavir.Ib04124 N
Pavir.J08102 Panicum virgatum Pavir.J08102 I
Pavir.J24924 Panicum virgatum Pavir.J24924 N
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N
PDK_20s1414531g001 Phoenix dactylifera PDK_20s1414531g001 N
PDK_20s1462571g003 Phoenix dactylifera PDK_20s1462571g003 N
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N
POPTR_0001s27300 Populus trichocarpa POPTR_0001s27300 N
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I
POPTR_0006s14740 Populus trichocarpa POPTR_0006s14740 N
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N
POPTR_0009s06540 Populus trichocarpa POPTR_0009s06540 N
POPTR_0011s10080 Populus trichocarpa POPTR_0011s10080 N
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N
POPTR_0018s07220 Populus trichocarpa POPTR_0018s07220 N
Pm010516 Prunus mume Pm010516 N
Pm016266 Prunus mume Pm016266 N
Pm026038 Prunus mume Pm026038 N
Pm027028 Prunus mume Pm027028 N
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N
29333.m001059 Ricinus communis 29333.m001059 N
29864.m001503 Ricinus communis 29864.m001503 N
29912.m005288 Ricinus communis 29912.m005288 N
30075.m001182 Ricinus communis 30075.m001182 N
SapurV1A.0027s0420 Salix purpurea SapurV1A.0027s0420 N
SapurV1A.0083s0230 Salix purpurea SapurV1A.0083s0230 N
SapurV1A.0111s0280 Salix purpurea SapurV1A.0111s0280 N
SapurV1A.0133s0410 Salix purpurea SapurV1A.0133s0410 I
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N
SapurV1A.0563s0020 Salix purpurea SapurV1A.0563s0020 N
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N
SapurV1A.2739s0010 Salix purpurea SapurV1A.2739s0010 N
SELMODRAFT_38090 Selaginella moellendorffii SELMODRAFT_38090 N
SELMODRAFT_438143 Selaginella moellendorffii SELMODRAFT_438143 N
Si022607m.g Setaria italica Si022607m.g N
Si036465m.g Setaria italica Si036465m.g N
Si037045m.g Setaria italica Si037045m.g I
Solyc01g006930.2 Solanum lycopersicum Solyc01g006930.2 N
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I
Solyc10g079150.1 Solanum lycopersicum Solyc10g079150.1 N
PGSC0003DMG400006863 Solanum tuberosum PGSC0003DMG400006863 I
PGSC0003DMG400008148 Solanum tuberosum PGSC0003DMG400008148 N
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N
PGSC0003DMG400021365 Solanum tuberosum PGSC0003DMG400021365 N
Sb01g011220 Sorghum bicolor Sb01g011220 I
Sb01g013430 Sorghum bicolor Sb01g013430 N
Sb08g021910 Sorghum bicolor Sb08g021910 N
TCM_005875 Theobroma cacao TCM_005875 I
TCM_022984 Theobroma cacao TCM_022984 N
TCM_024732 Theobroma cacao TCM_024732 I
TCM_026909 Theobroma cacao TCM_026909 N
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I
Traes_5AL_047ABC9FC Triticum aestivum Traes_5AL_047ABC9FC N
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N
Traes_5BL_B5F4BA2FD Triticum aestivum Traes_5BL_B5F4BA2FD N
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N
Traes_5DL_7F3ABFDD6 Triticum aestivum Traes_5DL_7F3ABFDD6 N
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N
TRIUR3_09920 Triticum urartu TRIUR3_09920 I
TRIUR3_27732 Triticum urartu TRIUR3_27732 N
TRIUR3_28596 Triticum urartu TRIUR3_28596 N
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N
VIT_10s0003g04650 Vitis vinifera VIT_10s0003g04650 N
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I
GRMZM2G091964 Zea mays GRMZM2G091964 I
GRMZM5G829103 Zea mays GRMZM5G829103 N