NR2E3 (Loxodonta africana)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSLAFG00000021987 T303559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.813 0.885
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.795 0.885
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.795 0.885
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.795 0.885
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.795 0.869
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.769 0.869
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000017516 Nuclear receptor 49 110
ENSLAFP00000021463 Nuclear receptor 41 100

Links

Other Nuclear receptor family TFs
Other Loxodonta africana TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I
MYB113 Arabidopsis thaliana AT1G66370 D
MYB114 Arabidopsis thaliana AT1G66380 I
MYB90 Arabidopsis thaliana AT1G66390 I
MYB75 Arabidopsis thaliana AT1G56650 I
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I
Bo00835s060 Brassica oleracea Bo00835s060 I
Bo6g099880 Brassica oleracea Bo6g099880 I
Bo6g100940 Brassica oleracea Bo6g100940 I
Bra004162 Brassica rapa Bra004162 I
Bra001917 Brassica rapa Bra001917 I
Bra039763 Brassica rapa Bra039763 I
PK17827.1 Cannabis sativa PK17827.1 I
PK05760.1 Cannabis sativa PK05760.1 I
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I
Carubv10020856m.g Capsella rubella Carubv10020856m.g I
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I
Ca_22078 Cicer arietinum Ca_22078 I
Ca_19630 Cicer arietinum Ca_19630 I
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I
GLYMA09G37010 Glycine max GLYMA09G37010 I
GLYMA18G41520 Glycine max GLYMA18G41520 I
GLYMA18G49690 Glycine max GLYMA18G49690 I
GLYMA19G02980 Glycine max GLYMA19G02980 I
GLYMA09G36983 Glycine max GLYMA09G36983 I
GLYMA09G36966 Glycine max GLYMA09G36966 I
GLYMA07G16980 Glycine max GLYMA07G16980 I
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I
Lus10009130.g Linum usitatissimum Lus10009130.g I
Lus10042522.g Linum usitatissimum Lus10042522.g I
Lus10028513.g Linum usitatissimum Lus10028513.g I
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I
MDP0000192051 Malus domestica MDP0000192051 I
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I
MTR_5g078800 Medicago truncatula MTR_5g078800 I
MTR_5g078860 Medicago truncatula MTR_5g078860 I
MTR_5g078910 Medicago truncatula MTR_5g078910 I
MTR_5g078930 Medicago truncatula MTR_5g078930 I
MTR_5g078950 Medicago truncatula MTR_5g078950 I
MTR_5g079120 Medicago truncatula MTR_5g079120 I
MTR_5g079220 Medicago truncatula MTR_5g079220 I
MTR_5g079290 Medicago truncatula MTR_5g079290 I
MTR_7g017260 Medicago truncatula MTR_7g017260 I
MTR_8g060940 Medicago truncatula MTR_8g060940 I
mgf019317m Mimulus guttatus mgf019317m I
Pm031337 Prunus mume Pm031337 I
Pm029445 Prunus mume Pm029445 I
Pm029442 Prunus mume Pm029442 I
Pm029440 Prunus mume Pm029440 I
Pm025429 Prunus mume Pm025429 I
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I
27763.m000042 Ricinus communis 27763.m000042 I
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I
TCM_019192 Theobroma cacao TCM_019192 I
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I