e_gw.322.32.1 (Branchiostoma floridae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 e_gw.322.32.1 T306958_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Eip75B
M03928_2.00 		Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK		 SELEX
Nitta et al.(2015)
Eip75B_1 		0.970 0.843
Eip75B
M03929_2.00 		Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT		 SELEX
Nitta et al.(2015)
Eip75B_2 		0.970 0.843
Eip75B
M06416_2.00 		Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM		 B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568 		0.970 0.843
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.960 0.671
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.960 0.671
NR1D2
M05659_2.00 		Homo sapiens
DWWNKRKGTYANTRKGTYRN
NYRACMYANTRACMYMNWWH		 SELEX
Yin et al.(2017)
NR1D2_eDBD_HT-SELEX 		0.955 0.857
Nr1d2
M09313_2.00 		Mus musculus
NVRDVWVTRRGTCANDVDN
NHBHNTGACYYABWBHYBN		 Misc
Kulakovskiy et al.(2013)
NR1D2_MOUSE.H11MO.0.A 		0.955 0.857
NR1D2
M05660_2.00 		Homo sapiens
NWWNBRGGKYAVTRGGKCRN
NYGMCCYABTRMCCYVNWWN		 SELEX
Yin et al.(2017)
NR1D2_eDBD_Methyl-HT-SELEX 		0.955 0.857
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.955 0.686
CBG17178
M02392_2.00 		Caenorhabditis briggsae
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH6634 		0.954 0.657
Eip78C
M06427_2.00 		Drosophila melanogaster
RGGTCA
TGACCY		 B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865 		0.954 0.686
NR1D1
M05605_2.00 		Homo sapiens
NWWNTRGGTYASTRGGTCAN
NTGACCYASTRACCYANWWN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_HT-SELEX 		0.953 0.843
NR1D1
M09276_2.00 		Homo sapiens
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_HUMAN.H11MO.0.B 		0.953 0.843
Nr1d1
M09310_2.00 		Mus musculus
DRVNMASTGGGNCANDNDN
NHNHNTGNCCCASTKNBYH		 Misc
Kulakovskiy et al.(2013)
NR1D1_MOUSE.H11MO.0.A 		0.953 0.843
NR1D1
M11136_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REVERBALPHA_Q6 		0.953 0.843
NR1D1
M05606_2.00 		Homo sapiens
NAWNKRGGTYAGTRGGTCRN
NYGACCYACTRACCYMNWTN		 SELEX
Yin et al.(2017)
NR1D1_eDBD_Methyl-HT-SELEX 		0.953 0.843
Rorb
M00820_2.00 		Mus musculus
NRGGTCANN
NNTGACCYN		 PBM
Weirauch et al.(2013)
pTH3469 		0.953 0.671
rorb
M02404_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6589 		0.953 0.671
RORB
M05677_2.00 		Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1 		0.953 0.671
RORB
M05678_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2 		0.953 0.671
RORB
M05883_2.00 		Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT		 SMiLE-seq
Isakova et al.(2017)
RORb 		0.953 0.671
RORB
M11187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORBETA_Q2 		0.953 0.671
RORB
M05679_2.00 		Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1 		0.953 0.671
RORB
M05680_2.00 		Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN		 SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2 		0.953 0.671
Rora
M00819_2.00 		Mus musculus
NNRGGTCA
TGACCYNN		 PBM
Weirauch et al.(2013)
pTH3464 		0.952 0.671
RORA
M03353_2.00 		Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN		 SELEX
Jolma et al.(2013)
RORA_1 		0.952 0.671
RORA
M03354_2.00 		Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW		 SELEX
Jolma et al.(2013)
RORA_2 		0.952 0.671
RORA
M02705_2.00 		Homo sapiens
WWVDAGGTCA
TGACCTHBWW		 SELEX
Mathelier et al.(2014)
MA0071.1 		0.952 0.671
RORA
M02706_2.00 		Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN		 SELEX
Mathelier et al.(2014)
MA0072.1 		0.952 0.671
RORA
M09265_2.00 		Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C 		0.952 0.671
Rora
M09327_2.00 		Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB		 Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C 		0.952 0.671
RORA
M11090_2.00 		Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH		 Transfac
Matys et al.(2006)
V$RORA1_01 		0.952 0.671
RORA
M11091_2.00 		Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH		 Transfac
Matys et al.(2006)
V$RORA2_01 		0.952 0.671
RORA
M11092_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORALPHA_Q4 		0.952 0.671
RORA
M11093_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RORA_Q4 		0.952 0.671
Rara
M00185_2.00 		Mus musculus
NRGGTCAN
NTGACCYN		 PBM
Badis et al.(2009)
Rara_1051 		0.950 0.614
RARA
M03369_2.00 		Homo sapiens
RRAGGTCAWBWRRGGTCA
TGACCYYWVWTGACCTYY		 SELEX
Jolma et al.(2013)
RARA_1 		0.950 0.614
RARA
M03370_2.00 		Homo sapiens
RAGGTCAAAAGGTCAWKB
VMWTGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
RARA_2 		0.950 0.614
RARA
M03371_2.00 		Homo sapiens
AGGTCAHNYWRAGGTCA
TGACCTYWRNDTGACCT		 SELEX
Jolma et al.(2013)
RARA_3 		0.950 0.614
RARA
M03372_2.00 		Homo sapiens
ARGGTCAAAAGGTCA
TGACCTTTTGACCYT		 SELEX
Jolma et al.(2013)
RARA_4 		0.950 0.614
RARA
M03373_2.00 		Homo sapiens
WRRGGTCAHSHRRGGTCA
TGACCYYDSDTGACCYYW		 SELEX
Jolma et al.(2013)
RARA_5 		0.950 0.614
RARA
M03374_2.00 		Homo sapiens
AGGTCAWNNARAGGTCA
TGACCTYTNNWTGACCT		 SELEX
Jolma et al.(2013)
RARA_6 		0.950 0.614
Rara
M03432_2.00 		Mus musculus
AAAGGTCAHBVRAGGTCA
TGACCTYBVDTGACCTTT		 SELEX
Jolma et al.(2013)
Rara_1 		0.950 0.614
Rara
M03433_2.00 		Mus musculus
AGGTCAHNHAAAGGTCA
TGACCTTTDNDTGACCT		 SELEX
Jolma et al.(2013)
Rara_2 		0.950 0.614
Rara
M03434_2.00 		Mus musculus
RAGGTCAAAAGGTCA
TGACCTTTTGACCTY		 SELEX
Jolma et al.(2013)
Rara_3 		0.950 0.614
RARA
M05607_2.00 		Homo sapiens
NVGGKCANNRGGKCAN
NTGMCCYNNTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1 		0.950 0.614
RARA
M05608_2.00 		Homo sapiens
NVGGKCAYGNCCBN
NVGGNCRTGMCCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2 		0.950 0.614
RARA
M05609_2.00 		Homo sapiens
NRRGGTCANV
BNTGACCYYN		 SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3 		0.950 0.614
RARA
M05878_2.00 		Homo sapiens
RAGGTCA
TGACCTY		 SMiLE-seq
Isakova et al.(2017)
RARa 		0.950 0.614
RARA
M09277_2.00 		Homo sapiens
RRRDVDBSNDRAGKTCARGG
CCYTGAMCTYHNSVHBHYYY		 Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A 		0.950 0.614
Rara
M09329_2.00 		Mus musculus
RGRTCRDRAGKTCAAGGTCA
TGACCTTGAMCTYHYGAYCY		 Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A 		0.950 0.614
RARA
M11137_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B1_Q6 		0.950 0.614
RARA
M05610_2.00 		Homo sapiens
DRGGKCRNDRGGTCRN
NYGACCYHNYGMCCYH		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1 		0.950 0.614
RARA
M05611_2.00 		Homo sapiens
NVGGTCAYGMCCYN
NRGGKCRTGACCBN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2 		0.950 0.614
RARA
M05612_2.00 		Homo sapiens
NRAGGTCANN
NNTGACCTYN		 SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3 		0.950 0.614
Rarb
M02401_2.00 		Mus musculus
NRRGGTCAHN
NDTGACCYYN		 PBM
Weirauch et al.(2014)
pTH2804 		0.950 0.614
RARB
M03355_2.00 		Homo sapiens
AAAGGTCAARAGGTCA
TGACCTYTTGACCTTT		 SELEX
Jolma et al.(2013)
RARB_1 		0.950 0.614
Rarb
M03423_2.00 		Mus musculus
WAAGGTCAAAAGGTCA
TGACCTTTTGACCTTW		 SELEX
Jolma et al.(2013)
Rarb_1 		0.950 0.614
Rarb
M03424_2.00 		Mus musculus
RRAGGTCANBWRAGGTCA
TGACCTYWVNTGACCTYY		 SELEX
Jolma et al.(2013)
Rarb_2 		0.950 0.614
Rarb
M03425_2.00 		Mus musculus
AGGTCAHVBWRAGGTCA
TGACCTYWVBDTGACCT		 SELEX
Jolma et al.(2013)
Rarb_3 		0.950 0.614
RARB
M05563_2.00 		Homo sapiens
NHAAGGTCAN
NTGACCTTDN		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1 		0.950 0.614
RARB
M05564_2.00 		Homo sapiens
RRGGTCAARRGGTCAN
NTGACCYYTTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2 		0.950 0.614
RARB
M05565_2.00 		Homo sapiens
DAGGTCAYGACCYY
RRGGTCRTGACCTH		 SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3 		0.950 0.614
RARB
M11094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR1B2_Q6 		0.950 0.614
RARB
M05566_2.00 		Homo sapiens
NHRAGGTCAH
DTGACCTYDN		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1 		0.950 0.614
RARB
M05567_2.00 		Homo sapiens
RRGGTCAHRRGGTCAN
NTGACCYYDTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2 		0.950 0.614
RARB
M05568_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3 		0.950 0.614
RORC
M02405_2.00 		Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6612 		0.948 0.643
RORC
M05621_2.00 		Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1 		0.946 0.657
RORC
M05622_2.00 		Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2 		0.946 0.657
RORC
M05880_2.00 		Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN		 SMiLE-seq
Isakova et al.(2017)
RORc 		0.946 0.657
RORC
M09282_2.00 		Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C 		0.946 0.657
RORC
M05623_2.00 		Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1 		0.946 0.657
RORC
M05624_2.00 		Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN		 SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2 		0.946 0.657
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.941 0.600
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.941 0.600
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.941 0.600
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.941 0.600
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.941 0.600
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.941 0.600
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.941 0.600
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.941 0.600
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.941 0.600
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.941 0.600
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.941 0.600
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.941 0.600
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.941 0.600
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.941 0.600
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.941 0.600
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.941 0.600
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.941 0.600
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.941 0.600
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.941 0.600
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.941 0.600
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.941 0.600
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.941 0.600
AAEL009588
M02388_2.00 		Aedes aegypti
NRGGTCR
YGACCYN		 PBM
Weirauch et al.(2014)
pTH5508 		0.934 0.671
Hr46
M02406_2.00 		Drosophila melanogaster
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6142 		0.934 0.671
Hr46
M03926_2.00 		Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY		 SELEX
Nitta et al.(2015)
Hr46_1 		0.934 0.671
Hr46
M06412_2.00 		Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT		 B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448 		0.934 0.671
Hr46
M06413_2.00 		Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD		 B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448 		0.934 0.671
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.913 0.600
PPARD
M05581_2.00 		Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1 		0.912 0.643
PPARD
M05582_2.00 		Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD		 SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2 		0.912 0.643
PPARD
M05583_2.00 		Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1 		0.912 0.643
PPARD
M05584_2.00 		Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN		 SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2 		0.912 0.643
O77476_BRUPA
M02422_2.00 		Brugia pahangi
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6019 		0.906 0.571
NR2C2
M03407_2.00 		Homo sapiens
VRGGTCAAAGGTCA
TGACCTTTGACCYB		 SELEX
Jolma et al.(2013)
NR2C2_1 		0.902 0.571
NR2C2
M05669_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX 		0.902 0.571
NR2C2
M08156_2.00 		Homo sapiens
NVRGGTCARAGGKCA
TGMCCTYTGACCYBN		 ChIP-seq
Mathelier et al.(2014)
MA0504.1 		0.902 0.571
NR2C2
M07990_2.00 		Homo sapiens
WBYRCTTCCGGGKYV
BRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD 		0.902 0.571
NR2C2
M07991_2.00 		Homo sapiens
DWBYRCTTCCGGGKY
RMCCCGGAAGYRVWH		 ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD 		0.902 0.571
NR2C2
M07992_2.00 		Homo sapiens
WBYRCTTCCGGGKYR
YRMCCCGGAAGYRVW		 ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD 		0.902 0.571
NR2C2
M08221_2.00 		Homo sapiens
DWBYDCTTCCGGGKY
RMCCCGGAAGHRVWH		 ChIP-seq
Contrino et al.(2012)
Mv97 		0.902 0.571
NR2C2
M08222_2.00 		Homo sapiens
TCARAGGTCA
TGACCTYTGA		 ChIP-seq
Contrino et al.(2012)
Mv98 		0.902 0.571
NR2C2
M09292_2.00 		Homo sapiens
RBTYMVRGGTCR
YGACCYBKRAVY		 Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B 		0.902 0.571
NR2C2
M09611_2.00 		Homo sapiens
RRGGTCARAGGTCA
TGACCTYTGACCYY		 Misc
Heinz et al.(2010)
Hela-TR4_GSE24685 		0.902 0.571
NR2C2
M11173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_03 		0.902 0.571
NR2C2
M11174_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR2C2_04 		0.902 0.571
NR2C2
M11175_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_01 		0.902 0.571
NR2C2
M11176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_03 		0.902 0.571
NR2C2
M11177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2_01 		0.902 0.571
NR2C2
M11178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q2 		0.902 0.571
NR2C2
M11179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TR4_Q3 		0.902 0.571
NR2C2
M05670_2.00 		Homo sapiens
NRGGTCRN
NYGACCYN		 SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX 		0.902 0.571
Nr2c2
M09303_2.00 		Mus musculus
RRGKSARAGGKCA
TGMCCTYTSMCYY		 Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A 		0.902 0.557
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.897 0.557
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.897 0.557
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.897 0.557
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.897 0.557
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.897 0.557
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.897 0.557
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.897 0.557
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.897 0.557
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.897 0.557
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.897 0.557
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.897 0.557
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.897 0.557
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.897 0.557
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.897 0.557
Nr2f2
M00184_2.00 		Mus musculus
RRGGTCAN
NTGACCYY		 PBM
Badis et al.(2009)
Nr2f2_2192 		0.896 0.571
NR2F2
M08157_2.00 		Homo sapiens
NNAAGGTCANN
NNTGACCTTNN		 ChIP-seq
Mathelier et al.(2014)
MA1111.1 		0.896 0.571
NR2F2
M08223_2.00 		Homo sapiens
AAAGGTCA
TGACCTTT		 ChIP-seq
Contrino et al.(2012)
Mv102 		0.896 0.571
NR2F2
M08224_2.00 		Homo sapiens
GGKCARAGGB
VCCTYTGMCC		 ChIP-seq
Contrino et al.(2012)
Mv104 		0.896 0.571
NR2F2
M09293_2.00 		Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN		 Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A 		0.896 0.571
Nr2f2
M09325_2.00 		Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN		 Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A 		0.896 0.571
NR2F2
M11180_2.00 		Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW		 Transfac
Matys et al.(2006)
V$ARP1_01 		0.896 0.571
NR2F2
M11181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF2_Q6 		0.896 0.571
nr2f2
M02393_2.00 		Danio rerio
NNRGGTCAN
NTGACCYNN		 PBM
Weirauch et al.(2014)
pTH5882 		0.895 0.571
Nr2f1
M00822_2.00 		Mus musculus
DRGGTCRN
NYGACCYH		 PBM
Weirauch et al.(2013)
pTH3811 		0.895 0.571
NR2F1
M03403_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_1 		0.895 0.571
NR2F1
M03404_2.00 		Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_2 		0.895 0.571
NR2F1
M03405_2.00 		Homo sapiens
RRGGTCAN
NTGACCYY		 SELEX
Jolma et al.(2013)
NR2F1_3 		0.895 0.571
NR2F1
M03406_2.00 		Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN		 SELEX
Jolma et al.(2013)
NR2F1_4 		0.895 0.571
NR2F1
M05661_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1 		0.895 0.571
NR2F1
M05662_2.00 		Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2 		0.895 0.571
NR2F1
M05665_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1 		0.895 0.571
NR2F1
M05666_2.00 		Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2 		0.895 0.571
NR2F1
M09291_2.00 		Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN		 Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C 		0.895 0.571
Nr2f1
M09334_2.00 		Mus musculus
YARAGGTCA
TGACCTYTR		 Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B 		0.895 0.571
NR2F1
M11172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01 		0.895 0.571
NR2F1
M05663_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1 		0.895 0.571
NR2F1
M05664_2.00 		Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2 		0.895 0.571
NR2F1
M05667_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1 		0.895 0.571
NR2F1
M05668_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2 		0.895 0.571
PPARA
M09295_2.00 		Homo sapiens
NWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWN		 Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B 		0.892 0.629
Ppara
M09314_2.00 		Mus musculus
HWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWD		 Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A 		0.892 0.629
PPARA
M11183_2.00 		Homo sapiens
CWRAWCYAGGNCAWAGKTCA
TGAMCTWTGNCCTRGWTYWG		 Transfac
Matys et al.(2006)
V$PPARA_01 		0.892 0.629
PPARA
M11184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARA_Q6 		0.892 0.629
Nr2c1
M00812_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH1284 		0.890 0.557
Nr2c1
M02399_2.00 		Mus musculus
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH3466 		0.890 0.557
NR2C1
M05597_2.00 		Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1 		0.890 0.557
NR2C1
M05598_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2 		0.890 0.557
NR2C1
M09273_2.00 		Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C 		0.890 0.557
Nr2c1
M09304_2.00 		Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY		 Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C 		0.890 0.557
NR2C1
M05599_2.00 		Homo sapiens
NRRGGTCAN
NTGACCYYN		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1 		0.890 0.557
NR2C1
M05600_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2 		0.890 0.557
svp
M06423_2.00 		Drosophila melanogaster
ARGGTCA
TGACCYK		 B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651 		0.889 0.543
Pparg
M05884_2.00 		Mus musculus
HWNTRGGKYANB
VNTRMCCYANWD		 SMiLE-seq
Isakova et al.(2017)
PPARg 		0.869 0.671
PPARG
M02707_2.00 		Homo sapiens
STRGGTCANNDTGACCYANW
WNTRGGTCAHNNTGACCYAS		 SELEX
Mathelier et al.(2014)
MA0066.1 		0.869 0.671
PPARG
M09278_2.00 		Homo sapiens
VWSKRGGKSARAGGKSA
TSMCCTYTSMCCYMSWB		 Misc
Kulakovskiy et al.(2013)
PPARG_HUMAN.H11MO.0.A 		0.869 0.671
Pparg
M09299_2.00 		Mus musculus
HWBTRGGBSARAGGKNA
TNMCCTYTSVCCYAVWD		 Misc
Kulakovskiy et al.(2013)
PPARG_MOUSE.H11MO.0.A 		0.869 0.671
Pparg
M09612_2.00 		Mus musculus
TRGGNCARAGGKCA
TGMCCTYTGNCCYA		 Misc
Heinz et al.(2010)
3T3L1-Pparg_GSE13511 		0.869 0.671
PPARG
M11138_2.00 		Homo sapiens
NNDRRGGTCAAAGGTCAHVND
HNBDTGACCTTTGACCYYHNN		 Transfac
Matys et al.(2006)
V$PPARG_01 		0.869 0.671
PPARG
M11139_2.00 		Homo sapiens
AWBTRGGTCACNDTGACCTASTT
AASTAGGTCAHNGTGACCYAVWT		 Transfac
Matys et al.(2006)
V$PPARG_02 		0.869 0.671
PPARG
M11140_2.00 		Homo sapiens
WWBHRGGNYAAAGKTCA
TGAMCTTTRNCCYDVWW		 Transfac
Matys et al.(2006)
V$PPARG_03 		0.869 0.671
PPARG
M11141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PPARG_Q6 		0.869 0.671
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.855 0.543
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.855 0.543
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.855 0.543
Q969A9_BOMMO
M02410_2.00 		Bombyx mori
VRGGTCDN
NHGACCYB		 PBM
Weirauch et al.(2014)
pTH5516 		0.855 0.529
Hr78
M06430_2.00 		Drosophila melanogaster
HVAGGTCA
TGACCTBD		 B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239 		0.823 0.571
usp
M03934_2.00 		Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT		 SELEX
Nitta et al.(2015)
usp_1 		0.820 0.543
usp
M06426_2.00 		Drosophila melanogaster
HRRGGTCAH
DTGACCYYD		 B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964 		0.820 0.543
usp
M02709_2.00 		Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC		 SELEX
Mathelier et al.(2014)
MA0016.1 		0.820 0.543
usp
M09689_2.00 		Drosophila melanogaster
KRGGTCACG
CGTGACCYM		 Misc
Kulakovskiy et al.(2009)
usp 		0.820 0.543
usp
M11191_2.00 		Drosophila melanogaster
GRGGTCAYS
SRTGACCYC		 Transfac
Matys et al.(2006)
I$CF1_01 		0.820 0.543
usp
M11192_2.00 		Drosophila melanogaster
GGGGTCAYS
SRTGACCCC		 Transfac
Matys et al.(2006)
I$CF1_02 		0.820 0.543
Rxra
M00181_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Badis et al.(2009)
Rxra_1035 		0.805 0.529
RXRA
M03408_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_1 		0.805 0.529
RXRA
M03409_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_2 		0.805 0.529
RXRA
M03410_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRA_3 		0.805 0.529
RXRA
M03411_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRA_4 		0.805 0.529
Rxra
M03421_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Rxra_1 		0.805 0.529
Rxra
M03422_2.00 		Mus musculus
RGGTCATGACCY
RGGTCATGACCY		 SELEX
Jolma et al.(2013)
Rxra_2 		0.805 0.529
RXRA
M05671_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX 		0.805 0.529
RXRA
M05882_2.00 		Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB		 SMiLE-seq
Isakova et al.(2017)
RXRa 		0.805 0.529
RXRA
M07993_2.00 		Homo sapiens
NRRGGTCA
TGACCYYN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha 		0.805 0.529
RXRA
M07994_2.00 		Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH		 ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha 		0.805 0.529
RXRA
M09294_2.00 		Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB		 Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A 		0.805 0.529
Rxra
M09306_2.00 		Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH		 Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A 		0.805 0.529
RXRA
M11182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RXRA_07 		0.805 0.529
RXRA
M05672_2.00 		Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX 		0.805 0.529
Rxrb
M02402_2.00 		Mus musculus
VRGGTCAH
DTGACCYB		 PBM
Weirauch et al.(2014)
pTH2861 		0.801 0.543
RXRB
M03415_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRB_1 		0.801 0.543
Rxrb
M03435_2.00 		Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
Rxrb_1 		0.801 0.543
RXRB
M05681_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1 		0.801 0.543
RXRB
M05682_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2 		0.801 0.543
RXRB
M09297_2.00 		Homo sapiens
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C 		0.801 0.543
Rxrb
M09330_2.00 		Mus musculus
DSAGGTCASD
HSTGACCTSH		 Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C 		0.801 0.543
RXRB
M05683_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1 		0.801 0.543
RXRB
M05684_2.00 		Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY		 SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2 		0.801 0.543
Rxrg
M02400_2.00 		Mus musculus
VRGGTCAN
NTGACCYB		 PBM
Weirauch et al.(2014)
pTH2880 		0.799 0.529
RXRG
M03375_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
RXRG_1 		0.799 0.529
RXRG
M03376_2.00 		Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY		 SELEX
Jolma et al.(2013)
RXRG_2 		0.799 0.529
RXRG
M03377_2.00 		Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC		 SELEX
Jolma et al.(2013)
RXRG_3 		0.799 0.529
RXRG
M03378_2.00 		Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN		 SELEX
Jolma et al.(2013)
RXRG_4 		0.799 0.529
RXRG
M02746_2.00 		Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC		 SELEX
Jolma et al.(2010)
RXRG_dimer 		0.799 0.529
RXRG
M05615_2.00 		Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1 		0.799 0.529
RXRG
M05616_2.00 		Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY		 SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2 		0.799 0.529
RXRG
M05879_2.00 		Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY		 SMiLE-seq
Isakova et al.(2017)
RXRg 		0.799 0.529
RXRG
M09280_2.00 		Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN		 Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B 		0.799 0.529
Rxrg
M09305_2.00 		Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB		 Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B 		0.799 0.529
RXRG
M05617_2.00 		Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1 		0.799 0.529
RXRG
M05618_2.00 		Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB		 SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2 		0.799 0.529
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.779 0.514
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.768 0.529
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.765 0.557
Nr1h3
M09301_2.00 		Mus musculus
VDGDNCARAGKBCAN
NTGVMCTYTGNHCHB		 Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A 		0.762 0.529
NR6A1
M05627_2.00 		Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX 		0.759 0.543
NR6A1
M09284_2.00 		Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT		 Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B 		0.759 0.543
NR6A1
M11148_2.00 		Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN		 Transfac
Matys et al.(2006)
V$GCNF_01 		0.759 0.543
NR6A1
M11149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCNF_Q3 		0.759 0.543
NR6A1
M05628_2.00 		Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN		 SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX 		0.759 0.543
NR1H3
M09264_2.00 		Homo sapiens
NHRRGGBHABHNNRGGNCA
TGNCCYNNDVTDVCCYYDN		 Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B 		0.759 0.529
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.756 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.322.32.1 Nuclear receptor 8 78

Links

Other Nuclear receptor family TFs
Other Branchiostoma floridae TFs

2302 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04018 Aegilops tauschii F775_04018 I
F775_22220 Aegilops tauschii F775_22220 I
F775_23219 Aegilops tauschii F775_23219 I
AMTR_s00032p00126420 Amborella trichopoda AMTR_s00032p00126420 I
Aquca_002_00586 Aquilegia coerulea Aquca_002_00586 I
Aquca_006_00295 Aquilegia coerulea Aquca_006_00295 I
Aquca_026_00367 Aquilegia coerulea Aquca_026_00367 I
anac094 Arabidopsis lyrata Al_scaffold_0007_3733 I
FEZ Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002274 I
anac042 Arabidopsis lyrata fgenesh2_kg.4__2460__AT2G43000.1 I
FEZ Arabidopsis thaliana AT1G26870 I
JUB1 Arabidopsis thaliana AT2G43000 D
ANAC094 Arabidopsis thaliana AT5G39820 D
Bostr.10058s0013 Boechera stricta Bostr.10058s0013 I
Bostr.12659s0312 Boechera stricta Bostr.12659s0312 I
BRADI1G58057 Brachypodium distachyon BRADI1G58057 I
BRADI3G37067 Brachypodium distachyon BRADI3G37067 I
BRADI3G59380 Brachypodium distachyon BRADI3G59380 I
BRADI4G30177 Brachypodium distachyon BRADI4G30177 I
Bo3g036290 Brassica oleracea Bo3g036290 I
Bo5g045190 Brassica oleracea Bo5g045190 I
Bo6g064260 Brassica oleracea Bo6g064260 I
Bo6g109250 Brassica oleracea Bo6g109250 I
Bo8g076410 Brassica oleracea Bo8g076410 I
Bra000282 Brassica rapa Bra000282 I
Bra004403 Brassica rapa Bra004403 I
Bra004736 Brassica rapa Bra004736 I
Bra016294 Brassica rapa Bra016294 I
Bra024677 Brassica rapa Bra024677 I
PK01104.1 Cannabis sativa PK01104.1 I
PK18158.1 Cannabis sativa PK18158.1 I
Cagra.0202s0012 Capsella grandiflora Cagra.0202s0012 I
Cagra.1150s0013 Capsella grandiflora Cagra.1150s0013 I
Cagra.5905s0003 Capsella grandiflora Cagra.5905s0003 I
Cagra.8367s0003 Capsella grandiflora Cagra.8367s0003 I
Carubv10006906m.g Capsella rubella Carubv10006906m.g I
Carubv10011253m.g Capsella rubella Carubv10011253m.g I
Carubv10021514m.g Capsella rubella Carubv10021514m.g I
Carubv10023730m.g Capsella rubella Carubv10023730m.g I
evm.TU.supercontig_128.20 Carica papaya evm.TU.supercontig_128.20 I
Ca_15236 Cicer arietinum Ca_15236 I
Ca_18749 Cicer arietinum Ca_18749 I
Ca_26322 Cicer arietinum Ca_26322 I
Cla010347 Citrullus lanatus Cla010347 I
Cla013684 Citrullus lanatus Cla013684 I
Ciclev10005465m.g Citrus clementina Ciclev10005465m.g I
Ciclev10006695m.g Citrus clementina Ciclev10006695m.g I
Ciclev10011891m.g Citrus clementina Ciclev10011891m.g I
Ciclev10031623m.g Citrus clementina Ciclev10031623m.g I
Ciclev10032203m.g Citrus clementina Ciclev10032203m.g I
orange1.1g015827m.g Citrus sinensis orange1.1g015827m.g I
orange1.1g021785m.g Citrus sinensis orange1.1g021785m.g I
orange1.1g046948m.g Citrus sinensis orange1.1g046948m.g I
orange1.1g047852m.g Citrus sinensis orange1.1g047852m.g I
Cucsa.118320 Cucumis sativus Cucsa.118320 I
Cucsa.265620 Cucumis sativus Cucsa.265620 I
Cucsa.285120 Cucumis sativus Cucsa.285120 I
Eucgr.G02506 Eucalyptus grandis Eucgr.G02506 I
Eucgr.I01940 Eucalyptus grandis Eucgr.I01940 I
Thhalv10007709m.g Eutrema salsugineum Thhalv10007709m.g I
Thhalv10019631m.g Eutrema salsugineum Thhalv10019631m.g I
Thhalv10027860m.g Eutrema salsugineum Thhalv10027860m.g I
gene03833-v1.0-hybrid Fragaria vesca gene03833-v1.0-hybrid I
GLYMA01G05680 Glycine max GLYMA01G05680 I
GLYMA02G11900 Glycine max GLYMA02G11900 I
GLYMA02G45371 Glycine max GLYMA02G45371 I
GLYMA08G41260 Glycine max GLYMA08G41260 I
GLYMA13G05350 Glycine max GLYMA13G05350 I
GLYMA14G03441 Glycine max GLYMA14G03441 I
GLYMA15G40950 Glycine max GLYMA15G40950 I
GLYMA18G15020 Glycine max GLYMA18G15020 I
GLYMA19G02580 Glycine max GLYMA19G02580 I
Gorai.001G091900 Gossypium raimondii Gorai.001G091900 I
Gorai.002G036700 Gossypium raimondii Gorai.002G036700 I
Gorai.004G270300 Gossypium raimondii Gorai.004G270300 I
Gorai.004G270400 Gossypium raimondii Gorai.004G270400 I
Gorai.005G141200 Gossypium raimondii Gorai.005G141200 I
Gorai.006G017700 Gossypium raimondii Gorai.006G017700 I
Gorai.009G357700 Gossypium raimondii Gorai.009G357700 I
Gorai.012G054800 Gossypium raimondii Gorai.012G054800 I
Gorai.013G085000 Gossypium raimondii Gorai.013G085000 I
MLOC_60079 Hordeum vulgare MLOC_60079 I
LPERR02G26510 Leersia perrieri LPERR02G26510 I
LPERR03G30390 Leersia perrieri LPERR03G30390 I
LPERR08G13170 Leersia perrieri LPERR08G13170 I
Lus10007263.g Linum usitatissimum Lus10007263.g I
Lus10015367.g Linum usitatissimum Lus10015367.g I
Lus10030478.g Linum usitatissimum Lus10030478.g I
Lus10036749.g Linum usitatissimum Lus10036749.g I
Lus10037178.g Linum usitatissimum Lus10037178.g I
chr2.LjT04L10.100.nc Lotus japonicus chr2.LjT04L10.100.nc I
chr3.CM0176.150.nc Lotus japonicus chr3.CM0176.150.nc I
CM1835.10.nc Lotus japonicus CM1835.10.nc I
LjT46I09.50.nd Lotus japonicus LjT46I09.50.nd I
MDP0000186765 Malus domestica MDP0000186765 I
MDP0000241821 Malus domestica MDP0000241821 I
MDP0000428265 Malus domestica MDP0000428265 I
cassava20477.m1 Manihot esculenta cassava20477.m1 I
cassava21730.m1 Manihot esculenta cassava21730.m1 I
cassava34069.m1 Manihot esculenta cassava34069.m1 I
cassava38350.m1 Manihot esculenta cassava38350.m1 I
cassava39074.m1 Manihot esculenta cassava39074.m1 I
cassava45330.m1 Manihot esculenta cassava45330.m1 I
MTR_5g040420 Medicago truncatula MTR_5g040420 I
MTR_5g090970 Medicago truncatula MTR_5g090970 I
MTR_6g011860 Medicago truncatula MTR_6g011860 I
MTR_8g467490 Medicago truncatula MTR_8g467490 I
mgf023960m Mimulus guttatus mgf023960m I
mgf025649m Mimulus guttatus mgf025649m I
mgf026196m Mimulus guttatus mgf026196m I
GSMUA_Achr5G02170_001 Musa acuminata GSMUA_Achr5G02170_001 I
GSMUA_Achr6G02680_001 Musa acuminata GSMUA_Achr6G02680_001 I
OBART02G32360 Oryza barthii OBART02G32360 I
OBART03G36060 Oryza barthii OBART03G36060 I
OBART08G15880 Oryza barthii OBART08G15880 I
OBART12G19610 Oryza barthii OBART12G19610 I
OB02G39340 Oryza brachyantha OB02G39340 I
OB03G42970 Oryza brachyantha OB03G42970 I
OB08G23420 Oryza brachyantha OB08G23420 I
ORGLA02G0278900 Oryza glaberrima ORGLA02G0278900 I
ORGLA03G0330500 Oryza glaberrima ORGLA03G0330500 I
ORGLA12G0169600 Oryza glaberrima ORGLA12G0169600 I
OGLUM02G33000 Oryza glumaepatula OGLUM02G33000 I
OGLUM03G35790 Oryza glumaepatula OGLUM03G35790 I
OGLUM08G16650 Oryza glumaepatula OGLUM08G16650 I
OGLUM12G21360 Oryza glumaepatula OGLUM12G21360 I
BGIOSGA009044 Oryza indica BGIOSGA009044 I
BGIOSGA013656 Oryza indica BGIOSGA013656 I
BGIOSGA028728 Oryza indica BGIOSGA028728 I
OLONG_016322 Oryza longistaminata OLONG_016322 I
OMERI02G31030 Oryza meridionalis OMERI02G31030 I
OMERI03G33230 Oryza meridionalis OMERI03G33230 I
OMERI08G13180 Oryza meridionalis OMERI08G13180 I
OMERI12G14510 Oryza meridionalis OMERI12G14510 I
ONIVA06G04660 Oryza nivara ONIVA06G04660 I
ONIVA08G17120 Oryza nivara ONIVA08G17120 I
ONIVA10G12510 Oryza nivara ONIVA10G12510 I
ONIVA12G18630 Oryza nivara ONIVA12G18630 I
OPUNC02G29910 Oryza punctata OPUNC02G29910 I
OPUNC03G33030 Oryza punctata OPUNC03G33030 I
OPUNC08G13940 Oryza punctata OPUNC08G13940 I
OPUNC12G17870 Oryza punctata OPUNC12G17870 I
ORUFI02G34050 Oryza rufipogon ORUFI02G34050 I
ORUFI03G37500 Oryza rufipogon ORUFI03G37500 I
ORUFI08G17800 Oryza rufipogon ORUFI08G17800 I
ORUFI12G21970 Oryza rufipogon ORUFI12G21970 I
OS02G0745250 Oryza sativa OS02G0745250 I
OS03G0777000 Oryza sativa OS03G0777000 I
OS08G0436700 Oryza sativa OS08G0436700 I
Pavir.Aa00706 Panicum virgatum Pavir.Aa00706 I
Pavir.Ab02998 Panicum virgatum Pavir.Ab02998 I
Pavir.Bb02181 Panicum virgatum Pavir.Bb02181 I
Pavir.Fa00893 Panicum virgatum Pavir.Fa00893 I
Pavir.J03639 Panicum virgatum Pavir.J03639 I
Pavir.J08304 Panicum virgatum Pavir.J08304 I
Pavir.J26531 Panicum virgatum Pavir.J26531 I
PDK_20s1311871g001 Phoenix dactylifera PDK_20s1311871g001 I
POPTR_0002s05820 Populus trichocarpa POPTR_0002s05820 I
POPTR_0004s12850 Populus trichocarpa POPTR_0004s12850 I
POPTR_0005s22710 Populus trichocarpa POPTR_0005s22710 I
POPTR_0007s08340 Populus trichocarpa POPTR_0007s08340 I
POPTR_0017s11830 Populus trichocarpa POPTR_0017s11830 I
Pm006506 Prunus mume Pm006506 I
Pm011037 Prunus mume Pm011037 I
Pm014764 Prunus mume Pm014764 I
Pm015876 Prunus mume Pm015876 I
PRUPE_ppa016710mg Prunus persica PRUPE_ppa016710mg I
PRUPE_ppa022043mg Prunus persica PRUPE_ppa022043mg I
PRUPE_ppa022278mg Prunus persica PRUPE_ppa022278mg I
PRUPE_ppa026843mg Prunus persica PRUPE_ppa026843mg I
29032.m000021 Ricinus communis 29032.m000021 I
29813.m001479 Ricinus communis 29813.m001479 I
30169.m006343 Ricinus communis 30169.m006343 I
SapurV1A.0085s0430 Salix purpurea SapurV1A.0085s0430 I
SapurV1A.0354s0230 Salix purpurea SapurV1A.0354s0230 I
SapurV1A.0552s0060 Salix purpurea SapurV1A.0552s0060 I
SapurV1A.2065s0010 Salix purpurea SapurV1A.2065s0010 I
SapurV1A.2645s0010 Salix purpurea SapurV1A.2645s0010 I
Si015514m.g Setaria italica Si015514m.g I
Si019308m.g Setaria italica Si019308m.g I
Si032144m.g Setaria italica Si032144m.g I
Si036447m.g Setaria italica Si036447m.g I
Solyc02g087920.2 Solanum lycopersicum Solyc02g087920.2 I
Solyc05g007550.1 Solanum lycopersicum Solyc05g007550.1 I
Solyc07g045030.2 Solanum lycopersicum Solyc07g045030.2 I
PGSC0003DMG400001323 Solanum tuberosum PGSC0003DMG400001323 I
PGSC0003DMG400031266 Solanum tuberosum PGSC0003DMG400031266 I
Sb01g006410 Sorghum bicolor Sb01g006410 I
Sb02g024593 Sorghum bicolor Sb02g024593 I
Sb04g028015 Sorghum bicolor Sb04g028015 I
Sb07g021400 Sorghum bicolor Sb07g021400 I
TCM_001955 Theobroma cacao TCM_001955 I
TCM_018508 Theobroma cacao TCM_018508 I
Traes_2AS_C73DE621D Triticum aestivum Traes_2AS_C73DE621D I
Traes_2BS_2244C64CC Triticum aestivum Traes_2BS_2244C64CC I
Traes_2BS_3B6ABF5E6 Triticum aestivum Traes_2BS_3B6ABF5E6 I
Traes_2DS_8C3F6A558 Triticum aestivum Traes_2DS_8C3F6A558 I
Traes_2DS_E2F2E9EAF Triticum aestivum Traes_2DS_E2F2E9EAF I
Traes_5AL_F2A49EB8E Triticum aestivum Traes_5AL_F2A49EB8E I
Traes_5AL_F35B9FF8E Triticum aestivum Traes_5AL_F35B9FF8E I
Traes_5BL_2131D2B17 Triticum aestivum Traes_5BL_2131D2B17 I
Traes_5BL_38DFDFE41 Triticum aestivum Traes_5BL_38DFDFE41 I
Traes_5BL_39FF03C5D Triticum aestivum Traes_5BL_39FF03C5D I
Traes_5BL_57ABE6426 Triticum aestivum Traes_5BL_57ABE6426 I
Traes_5DL_0713E8429 Triticum aestivum Traes_5DL_0713E8429 I
Traes_6AL_0D7866801 Triticum aestivum Traes_6AL_0D7866801 I
Traes_6BL_A169A3ECB Triticum aestivum Traes_6BL_A169A3ECB I
Traes_6DL_DA233B945 Triticum aestivum Traes_6DL_DA233B945 I
TRIUR3_01901 Triticum urartu TRIUR3_01901 I
TRIUR3_04556 Triticum urartu TRIUR3_04556 I
TRIUR3_04557 Triticum urartu TRIUR3_04557 I
TRIUR3_04784 Triticum urartu TRIUR3_04784 I
VIT_01s0026g02360 Vitis vinifera VIT_01s0026g02360 I
anac042 Vitis vinifera VIT_12s0028g00860 I
anac094 Vitis vinifera VIT_14s0108g00860 I
VIT_19s0027g00860 Vitis vinifera VIT_19s0027g00860 I
VIT_19s0027g00870 Vitis vinifera VIT_19s0027g00870 I
AC198937.4_FG005 Zea mays AC198937.4_FG005 I
GRMZM2G100593 Zea mays GRMZM2G100593 I
GRMZM2G112548 Zea mays GRMZM2G112548 I
GRMZM2G152543 Zea mays GRMZM2G152543 I
GRMZM2G159094 Zea mays GRMZM2G159094 I