SMU15015230 (Schmidtea mediterranea)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 SMU15015230 T312254_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15015230 Paired box 21 130

Links

Other Paired box family TFs
Other Schmidtea mediterranea TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13961 Aegilops tauschii F775_13961 I
F775_20638 Aegilops tauschii F775_20638 I
F775_30082 Aegilops tauschii F775_30082 I
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I
VND6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001814 I
NAC026 Arabidopsis thaliana AT1G62700 I
NAC69 Arabidopsis thaliana AT4G01550 D
NAC101 Arabidopsis thaliana AT5G62380 D
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I
Bostr.0568s0569 Boechera stricta Bostr.0568s0569 I
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I
BRADI1G52480 Brachypodium distachyon BRADI1G52480 N
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I
Bo2g164090 Brassica oleracea Bo2g164090 I
Bo3g107700 Brassica oleracea Bo3g107700 I
Bo5g002810 Brassica oleracea Bo5g002810 I
Bo5g002850 Brassica oleracea Bo5g002850 I
Bo9g004070 Brassica oleracea Bo9g004070 I
Bo9g014940 Brassica oleracea Bo9g014940 I
Bra008553 Brassica rapa Bra008553 I
Bra010077 Brassica rapa Bra010077 I
Bra027596 Brassica rapa Bra027596 I
Bra029266 Brassica rapa Bra029266 I
Bra035896 Brassica rapa Bra035896 I
Bra036328 Brassica rapa Bra036328 I
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I
Carubv10000489m.g Capsella rubella Carubv10000489m.g I
Carubv10003260m.g Capsella rubella Carubv10003260m.g I
Carubv10009049m.g Capsella rubella Carubv10009049m.g I
Carubv10009451m.g Capsella rubella Carubv10009451m.g I
Carubv10026697m.g Capsella rubella Carubv10026697m.g I
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N
Ca_04069 Cicer arietinum Ca_04069 I
Ca_20988 Cicer arietinum Ca_20988 I
Ca_27204 Cicer arietinum Ca_27204 I
Cla011742 Citrullus lanatus Cla011742 I
Eucgr.I02571 Eucalyptus grandis Eucgr.I02571 N
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I
Thhalv10004488m.g Eutrema salsugineum Thhalv10004488m.g I
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I
gene23394-v1.0-hybrid Fragaria vesca gene23394-v1.0-hybrid N
GLYMA12G31211 Glycine max GLYMA12G31211 I
GLYMA14G36840 Glycine max GLYMA14G36840 I
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I
Gorai.009G083500 Gossypium raimondii Gorai.009G083500 N
MLOC_13932 Hordeum vulgare MLOC_13932 I
MLOC_37843 Hordeum vulgare MLOC_37843 I
MLOC_50406 Hordeum vulgare MLOC_50406 I
MLOC_65286 Hordeum vulgare MLOC_65286 I
MLOC_75297 Hordeum vulgare MLOC_75297 N
LPERR04G11740 Leersia perrieri LPERR04G11740 I
LPERR06G00060 Leersia perrieri LPERR06G00060 N
LPERR08G03510 Leersia perrieri LPERR08G03510 I
LPERR08G17020 Leersia perrieri LPERR08G17020 I
LPERR09G14720 Leersia perrieri LPERR09G14720 I
LPERR11G01300 Leersia perrieri LPERR11G01300 I
LPERR12G01440 Leersia perrieri LPERR12G01440 I
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I
MDP0000214515 Malus domestica MDP0000214515 I
MDP0000282616 Malus domestica MDP0000282616 I
MDP0000311190 Malus domestica MDP0000311190 I
MDP0000575835 Malus domestica MDP0000575835 I
MDP0000907489 Malus domestica MDP0000907489 N
MTR_3g093050 Medicago truncatula MTR_3g093050 I
MTR_5g069030 Medicago truncatula MTR_5g069030 I
MTR_8g023840 Medicago truncatula MTR_8g023840 I
MTR_8g023860 Medicago truncatula MTR_8g023860 I
MTR_8g023930 Medicago truncatula MTR_8g023930 I
mgf002365m Mimulus guttatus mgf002365m I
mgf013201m Mimulus guttatus mgf013201m I
mgf015836m Mimulus guttatus mgf015836m I
mgf022344m Mimulus guttatus mgf022344m I
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I
OBART01G00360 Oryza barthii OBART01G00360 I
OBART01G16620 Oryza barthii OBART01G16620 I
OBART06G00060 Oryza barthii OBART06G00060 N
OBART08G03460 Oryza barthii OBART08G03460 I
OB08G13730 Oryza brachyantha OB08G13730 I
OB09G25590 Oryza brachyantha OB09G25590 I
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I
ORGLA06G0000500 Oryza glaberrima ORGLA06G0000500 N
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I
OGLUM06G00040 Oryza glumaepatula OGLUM06G00040 N
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I
BGIOSGA001578 Oryza indica BGIOSGA001578 I
BGIOSGA002597 Oryza indica BGIOSGA002597 I
BGIOSGA014034 Oryza indica BGIOSGA014034 I
BGIOSGA022116 Oryza indica BGIOSGA022116 N
BGIOSGA026695 Oryza indica BGIOSGA026695 I
BGIOSGA031230 Oryza indica BGIOSGA031230 I
OLONG_000105 Oryza longistaminata OLONG_000105 I
OLONG_004904 Oryza longistaminata OLONG_004904 N
OLONG_022415 Oryza longistaminata OLONG_022415 I
OMERI01G15210 Oryza meridionalis OMERI01G15210 I
OMERI01G15230 Oryza meridionalis OMERI01G15230 I
OMERI04G25730 Oryza meridionalis OMERI04G25730 I
OMERI06G00050 Oryza meridionalis OMERI06G00050 N
OMERI08G03500 Oryza meridionalis OMERI08G03500 I
OMERI09G14170 Oryza meridionalis OMERI09G14170 I
ONIVA01G00280 Oryza nivara ONIVA01G00280 I
ONIVA01G18370 Oryza nivara ONIVA01G18370 I
ONIVA04G29890 Oryza nivara ONIVA04G29890 I
ONIVA06G00080 Oryza nivara ONIVA06G00080 N
ONIVA08G03440 Oryza nivara ONIVA08G03440 I
ONIVA08G22710 Oryza nivara ONIVA08G22710 I
ONIVA09G20130 Oryza nivara ONIVA09G20130 I
OPUNC01G00320 Oryza punctata OPUNC01G00320 I
OPUNC04G28220 Oryza punctata OPUNC04G28220 I
OPUNC06G00030 Oryza punctata OPUNC06G00030 N
OPUNC08G03310 Oryza punctata OPUNC08G03310 I
OPUNC08G18240 Oryza punctata OPUNC08G18240 I
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I
ORUFI06G00070 Oryza rufipogon ORUFI06G00070 N
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I
OS01G0104500 Oryza sativa OS01G0104500 I
OS01G0393100 Oryza sativa OS01G0393100 I
OS04G0691300 Oryza sativa OS04G0691300 I
OS06G0101800 Oryza sativa OS06G0101800 N
OS08G0157900 Oryza sativa OS08G0157900 I
OS08G0511200 Oryza sativa OS08G0511200 I
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I
Pm018442 Prunus mume Pm018442 N
Pm018445 Prunus mume Pm018445 N
Pm019659 Prunus mume Pm019659 I
Pm028711 Prunus mume Pm028711 I
Pm028712 Prunus mume Pm028712 N
PRUPE_ppa008321mg Prunus persica PRUPE_ppa008321mg N
PRUPE_ppa016876mg Prunus persica PRUPE_ppa016876mg N
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I
PRUPE_ppa023197mg Prunus persica PRUPE_ppa023197mg N
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I
Si006105m.g Setaria italica Si006105m.g N
Si013369m.g Setaria italica Si013369m.g I
Si022714m.g Setaria italica Si022714m.g I
Si022723m.g Setaria italica Si022723m.g I
Si032702m.g Setaria italica Si032702m.g I
Si036303m.g Setaria italica Si036303m.g I
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I
Sb02g026510 Sorghum bicolor Sb02g026510 I
Sb02g032230 Sorghum bicolor Sb02g032230 I
Sb07g003900 Sorghum bicolor Sb07g003900 I
Sb08g022560 Sorghum bicolor Sb08g022560 I
Sb10g000101 Sorghum bicolor Sb10g000101 N
TCM_015535 Theobroma cacao TCM_015535 I
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I
Traes_7AS_A6C843545 Triticum aestivum Traes_7AS_A6C843545 N
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I
TRIUR3_13805 Triticum urartu TRIUR3_13805 I
TRIUR3_32613 Triticum urartu TRIUR3_32613 I
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I
GRMZM2G003715 Zea mays GRMZM2G003715 I
GRMZM2G052239 Zea mays GRMZM2G052239 I
GRMZM2G139700 Zea mays GRMZM2G139700 I
GRMZM2G163914 Zea mays GRMZM2G163914 N
GRMZM2G459156 Zea mays GRMZM2G459156 N