scaffold_303520.1 (Arabidopsis lyrata)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 scaffold_303520.1 T315678_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_303520.1 PLATZ 60 131

Links

Other PLATZ family TFs
Other Arabidopsis lyrata TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.708
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.931
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.708
Aquca_016_00081 Aquilegia coerulea Aquca_016_00081 N 0.944
fgenesh2_kg.3__2996__AT2G12646.1 Arabidopsis lyrata fgenesh2_kg.3__2996__AT2G12646.1 N 1.000
AT2G12646 Arabidopsis thaliana AT2G12646 N 1.000
Bostr.22685s0001 Boechera stricta Bostr.22685s0001 N 1.000
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.722
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.722
BRADI3G06190 Brachypodium distachyon BRADI3G06190 N 0.861
Bo3g087070 Brassica oleracea Bo3g087070 N 0.972
Bo9g022400 Brassica oleracea Bo9g022400 N 0.958
Bra013149 Brassica rapa Bra013149 N 0.972
Bra037203 Brassica rapa Bra037203 N 0.958
Cagra.2506s0001 Capsella grandiflora Cagra.2506s0001 N 1.000
Carubv10015124m.g Capsella rubella Carubv10015124m.g N 1.000
evm.TU.supercontig_46.74 Carica papaya evm.TU.supercontig_46.74 N 0.972
Ca_06740 Cicer arietinum Ca_06740 N 0.972
Ciclev10010747m.g Citrus clementina Ciclev10010747m.g N 0.944
orange1.1g042361m.g Citrus sinensis orange1.1g042361m.g N 0.944
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.944
Eucgr.C00450 Eucalyptus grandis Eucgr.C00450 N 0.986
Thhalv10022828m.g Eutrema salsugineum Thhalv10022828m.g N 0.986
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.931
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.708
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.931
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.972
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.931
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.972
Gorai.004G110400 Gossypium raimondii Gorai.004G110400 N 0.944
Gorai.009G013500 Gossypium raimondii Gorai.009G013500 N 0.986
Gorai.010G057300 Gossypium raimondii Gorai.010G057300 N 0.972
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.722
MLOC_37403 Hordeum vulgare MLOC_37403 N 0.861
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.722
LPERR02G05550 Leersia perrieri LPERR02G05550 N 0.875
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.722
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.861
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.847
Lus10038103.g Linum usitatissimum Lus10038103.g N 0.819
Lus10039989.g Linum usitatissimum Lus10039989.g N 0.833
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.875
MDP0000639526 Malus domestica MDP0000639526 N 0.986
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.931
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.972
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.903
mgf020898m Mimulus guttatus mgf020898m N 0.875
GSMUA_Achr1G09990_001 Musa acuminata GSMUA_Achr1G09990_001 N 0.903
GSMUA_Achr6G30690_001 Musa acuminata GSMUA_Achr6G30690_001 N 0.806
GSMUA_Achr6G35220_001 Musa acuminata GSMUA_Achr6G35220_001 N 0.861
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.750
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.750
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.875
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.722
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.736
OBART02G05520 Oryza barthii OBART02G05520 N 0.722
OBART06G24000 Oryza barthii OBART06G24000 N 0.722
OB02G14750 Oryza brachyantha OB02G14750 N 0.722
OB02G15630 Oryza brachyantha OB02G15630 N 0.875
ORGLA02G0058300 Oryza glaberrima ORGLA02G0058300 N 0.875
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.722
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.722
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.708
BGIOSGA007009 Oryza indica BGIOSGA007009 N 0.875
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.722
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.722
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.722
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.722
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.722
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.722
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.722
OPUNC02G05490 Oryza punctata OPUNC02G05490 N 0.875
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.722
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.722
OS02G0172800 Oryza sativa OS02G0172800 N 0.722
OS02G0183000 Oryza sativa OS02G0183000 N 0.875
OS06G0666100 Oryza sativa OS06G0666100 N 0.722
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.764
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.750
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.875
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.708
Pavir.J35161 Panicum virgatum Pavir.J35161 N 0.861
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.819
PDK_20s1397531g003 Phoenix dactylifera PDK_20s1397531g003 N 0.875
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.750
POPTR_0006s05950 Populus trichocarpa POPTR_0006s05950 N 0.944
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.958
Pm027672 Prunus mume Pm027672 N 0.972
PRUPE_ppa019806mg Prunus persica PRUPE_ppa019806mg N 0.958
30090.m000247 Ricinus communis 30090.m000247 N 0.944
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.958
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.944
Si018139m.g Setaria italica Si018139m.g N 0.750
Si019544m.g Setaria italica Si019544m.g N 0.875
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.944
Solyc12g010470.1 Solanum lycopersicum Solyc12g010470.1 N 0.817
PGSC0003DMG400007885 Solanum tuberosum PGSC0003DMG400007885 N 0.817
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.750
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.861
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.722
TCM_038233 Theobroma cacao TCM_038233 N 0.986
Traes_6AS_3CC6C63F9 Triticum aestivum Traes_6AS_3CC6C63F9 N 0.861
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.722
Traes_6BS_A7DE5BFD1 Triticum aestivum Traes_6BS_A7DE5BFD1 N 0.861
Traes_6DS_9C50DA0DE Triticum aestivum Traes_6DS_9C50DA0DE N 0.861
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.722
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.722
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.708
TRIUR3_16881 Triticum urartu TRIUR3_16881 N 0.861
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.722
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.972
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.750
GRMZM2G070295 Zea mays GRMZM2G070295 N 0.875