Ogr18048 (Ophisaurus gracilis)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Ogr18048 T317811_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.787 0.787
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		0.781 0.781
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		0.781 0.781
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		0.781 0.781
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr18048 Rel 40 220

Links

Other Rel family TFs
Other Ophisaurus gracilis TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I 0.787
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I 0.893
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I 0.840
NFKB2 Anolis carolinensis ENSACAG00000014215 I 0.923
Afo_R002575 Aptenodytes forsteri Afo_R002575 I 0.858
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I 0.787
NFKB2 Bos taurus ENSBTAG00000006017 I 0.787
Brh_R009664 Buceros rhinoceros Brh_R009664 I 0.870
NFKB2 Callithrix jacchus ENSCJAG00000017928 I 0.787
Aan_R011824 Calypte anna Aan_R011824 I 0.858
NFKB2 Canis familiaris ENSCAFG00000010155 I 0.787
NFKB2 Cavia porcellus ENSCPOG00000004847 I 0.787
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I 0.893
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I 0.781
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I 0.787
Nfkb2 Dipodomys ordii ENSDORG00000013409 I 0.787
NFKB2 Echinops telfairi ENSETEG00000002347 I 0.750
NFKB2 Equus caballus ENSECAG00000019593 I 0.787
NFKB2 Felis catus ENSFCAG00000001242 I 0.787
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I 0.864
NFKB2 Gallus gallus ENSGALG00000005653 I 0.864
Gfo_R002459 Geospiza fortis Gfo_R002459 I 0.858
NFKB2 Gorilla gorilla ENSGGOG00000006971 I 0.781
NFKB2 Homo sapiens ENSG00000077150 D 0.931
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I 0.787
ENSLOCG00000012413 Lepisosteus oculatus ENSLOCG00000012413 N 0.716
NFKB2 Loxodonta africana ENSLAFG00000006805 I 0.787
ENSP00000189444 Macaca fascicularis ENSP00000189444 I 0.773
NFKB2 Macaca mulatta ENSMMUG00000002990 I 0.781
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I 0.787
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I 0.870
NFKB2 Microcebus murinus ENSMICG00000011856 I 0.793
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I 0.787
Nfkb1 Mus musculus ENSMUSG00000028163 D 0.714
Nfkb2 Mus musculus ENSMUSG00000025225 D 0.787
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I 0.787
NFKB2 Myotis lucifugus ENSMLUG00000006287 I 0.787
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I 0.781
NFKB2 Ochotona princeps ENSOPRG00000006569 I 0.766
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I 0.755
ENSOANG00000028755 Ornithorhynchus anatinus ENSOANG00000028755 I 0.787
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I 0.781
NFKB2 Otolemur garnettii ENSOGAG00000016379 I 0.787
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I 0.787
NFKB2 Pan troglodytes ENSPTRG00000002888 I 0.781
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I 0.781
ENSPFOG00000012589 Poecilia formosa ENSPFOG00000012589 N 0.704
Pvit_13855 Pogona vitticeps Pvit_13855 I 0.899
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I 0.781
NFKB2 Procavia capensis ENSPCAG00000011503 I 0.787
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I 0.787
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I 0.793
NFKB2 Sorex araneus ENSSARG00000006180 I 0.754
NFKB1 Sus scrofa ENSSSCG00000030957 I 0.833
NFKB2 Sus scrofa ENSSSCG00000010580 I 0.787
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I 0.858
nfkb2 Tetraodon nigroviridis ENSTNIG00000013359 N 0.710
NFKB2 Tursiops truncatus ENSTTRG00000008357 I 0.740
nfkb2.S Xenopus laevis XB-GENE-970090 N 0.787
nfkb2 Xenopus tropicalis XB-GENE-970084 I 0.787
ENSXMAG00000000193 Xiphophorus maculatus ENSXMAG00000000193 N 0.710