ENSLOCG00000015816 (Lepisosteus oculatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSLOCG00000015816 T319407_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		1.000 1.000
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		1.000 1.000
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		1.000 1.000
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		1.000 1.000
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		1.000 1.000
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		1.000 1.000
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		1.000 1.000
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		1.000 1.000
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		1.000 1.000
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		1.000 1.000
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		1.000 1.000
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		1.000 1.000
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.946 0.946
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.946 0.946
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.946 0.946
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.946 0.946
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.946 0.946
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.946 0.946
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.946 0.946
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.946 0.946
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.946 0.946
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.946 0.946
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.946 0.946
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.946 0.946
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.923 0.923
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.923 0.923
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.923 0.923
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.923 0.923
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.923 0.923
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.923 0.923
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.923 0.923
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.923 0.923
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.923 0.923
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.923 0.923
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.923 0.923
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.923 0.923
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.731 0.731
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.731 0.731
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.731 0.731
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.731 0.731
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000019471 Runt 137 266

Links

Other Runt family TFs
Other Lepisosteus oculatus TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.738
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I 0.746
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.738
AAEL006160 Aedes aegypti AAEL006160 I 0.762
AAEL006167 Aedes aegypti AAEL006167 I 0.000
AAEL007040 Aedes aegypti AAEL007040 I 0.723
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I 1.000
Alligator_sinensis_CCG010991.1 Alligator sinensis Alligator_sinensis_CCG010991.1 I 0.973
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.921
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.978
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.957
AALB007752 Anopheles albimanus AALB007752 I 0.725
AALB007754 Anopheles albimanus AALB007754 I 0.000
AALB009220 Anopheles albimanus AALB009220 I 0.731
AARA004356 Anopheles arabiensis AARA004356 I 0.723
AARA011472 Anopheles arabiensis AARA011472 I 0.000
AATE002063 Anopheles atroparvus AATE002063 I 0.762
AATE017340 Anopheles atroparvus AATE017340 I 0.000
ACHR004078 Anopheles christyi ACHR004078 I 0.723
ACHR006341 Anopheles christyi ACHR006341 I 0.000
ACOM031089 Anopheles coluzzii ACOM031089 I 0.000
ACUA008762 Anopheles culicifacies ACUA008762 I 0.000
ACUA016618 Anopheles culicifacies ACUA016618 I 0.000
ADIR005600 Anopheles dirus ADIR005600 I 0.000
AEPI003479 Anopheles epiroticus AEPI003479 I 0.723
AEPI010884 Anopheles epiroticus AEPI010884 I 0.000
AFAF000166 Anopheles farauti AFAF000166 I 0.000
AFUN010423 Anopheles funestus AFUN010423 I 0.000
AGAP001094 Anopheles gambiae AGAP001094 I 0.000
AGAP002506 Anopheles gambiae AGAP002506 I 0.723
AMAM011616 Anopheles maculatus AMAM011616 I 0.720
AMAM016300 Anopheles maculatus AMAM016300 I 0.000
AMEC007551 Anopheles melas AMEC007551 I 0.000
AMEM004753 Anopheles merus AMEM004753 I 0.000
AMEM017856 Anopheles merus AMEM017856 I 0.723
AMIN002518 Anopheles minimus AMIN002518 I 0.723
AMIN005759 Anopheles minimus AMIN005759 I 0.000
AQUA009446 Anopheles quadriannulatus AQUA009446 I 0.720
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.000
ASIS001308 Anopheles sinensis ASIS001308 I 0.000
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.000
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.762
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.723
GB52718 Apis mellifera GB52718 I 0.754
GB52719 Apis mellifera GB52719 I 0.708
GB52721 Apis mellifera GB52721 I 0.777
GB52761 Apis mellifera GB52761 I 0.762
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.944
Afo_R008955 Aptenodytes forsteri Afo_R008955 I 0.988
ACEP16394 Atta cephalotes ACEP16394 I 0.000
ACEP16400 Atta cephalotes ACEP16400 I 0.762
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.700
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I 1.000
RUNX3 Bos taurus ENSBTAG00000019800 I 0.000
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.978
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.944
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.960
Aan_R005895 Calypte anna Aan_R005895 I 0.978
Aan_R007315 Calypte anna Aan_R007315 I 0.944
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.785
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.000
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.754
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.746
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.960
CapteG142159 Capitella teleta CapteG142159 I 0.738
CLEC011122 Cimex lectularius CLEC011122 I 0.000
CpipJ_CPIJ001309 Culex pipiens CpipJ_CPIJ001309 I 0.000
CpipJ_CPIJ006369 Culex pipiens CpipJ_CPIJ006369 I 0.000
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I 0.000
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I 0.711
CPIJ001309 Culex quinquefasciatus CPIJ001309 I 0.000
CPIJ006369 Culex quinquefasciatus CPIJ006369 I 0.000
CPIJ006373 Culex quinquefasciatus CPIJ006373 I 0.000
CPIJ016825 Culex quinquefasciatus CPIJ016825 I 0.711
KGM_21065 Danaus plexippus KGM_21065 I 0.700
KGM_21067 Danaus plexippus KGM_21067 I 0.000
KGM_21075 Danaus plexippus KGM_21075 I 0.762
runx2b Danio rerio ENSDARG00000059233 I 0.985
CABZ01102124.1 Danio rerio ENSDARG00000103592 I 0.947
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.769
GF15967 Drosophila ananassae FBgn0092990 I 0.708
GF15970 Drosophila ananassae FBgn0092993 I 0.000
run Drosophila erecta FBgn0085118 I 0.000
GG18309 Drosophila erecta FBgn0110525 I 0.731
GG19691 Drosophila erecta FBgn0111893 I 0.708
GH17737 Drosophila grimshawi FBgn0125207 I 0.708
GH17740 Drosophila grimshawi FBgn0125210 I 0.000
lz Drosophila melanogaster FBgn0002576 D 0.731
run Drosophila melanogaster FBgn0003300 D 0.000
RunxB Drosophila melanogaster FBgn0259162 I 0.708
GI14398 Drosophila mojavensis FBgn0137150 I 0.738
GI15484 Drosophila mojavensis FBgn0138233 I 0.000
GI15491 Drosophila mojavensis FBgn0138240 I 0.000
GL15800 Drosophila persimilis FBgn0153404 I 0.708
GL15806 Drosophila persimilis FBgn0153410 I 0.000
GL16499 Drosophila persimilis FBgn0154103 I 0.746
run Drosophila pseudoobscura FBgn0013862 I 0.000
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.708
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.746
GM22478 Drosophila sechellia FBgn0177348 I 0.731
GM23044 Drosophila sechellia FBgn0177912 I 0.708
GM23050 Drosophila sechellia FBgn0177918 I 0.000
run Drosophila simulans FBgn0016352 I 0.000
GD16951 Drosophila simulans FBgn0188530 I 0.748
GD17495 Drosophila simulans FBgn0189047 I 0.708
run Drosophila virilis FBgn0013920 I 0.000
GJ18742 Drosophila virilis FBgn0205894 I 0.738
GJ19245 Drosophila virilis FBgn0206390 I 0.708
GK19810 Drosophila willistoni FBgn0221808 I 0.708
GK19815 Drosophila willistoni FBgn0221813 I 0.000
GK25373 Drosophila willistoni FBgn0227332 I 0.738
run Drosophila yakuba FBgn0084618 I 0.000
GE17788 Drosophila yakuba FBgn0235232 I 0.731
GE17890 Drosophila yakuba FBgn0235328 I 0.708
RUNX2 Equus caballus ENSECAG00000020875 I 0.937
RUNX2 Felis catus ENSFCAG00000022480 I 1.000
ENSFCAG00000029032 Felis catus ENSFCAG00000029032 I 0.954
Gfo_R013848 Geospiza fortis Gfo_R013848 I 0.974
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.746
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.785
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.000
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.762
HMEL009842 Heliconius melpomene HMEL009842 I 0.769
HMEL014739 Heliconius melpomene HMEL014739 I 0.700
ENSSTOG00000020082 Ictidomys tridecemlineatus ENSSTOG00000020082 I 0.947
LDEC003023 Leptinotarsa decemlineata LDEC003023 I 0.000
LDEC006645 Leptinotarsa decemlineata LDEC006645 I 0.000
RUNX2 Loxodonta africana ENSLAFG00000005054 I 1.000
LCUP002647 Lucilia cuprina LCUP002647 I 0.744
LCUP002652 Lucilia cuprina LCUP002652 I 0.702
LCUP002656 Lucilia cuprina LCUP002656 I 0.738
LCUP002659 Lucilia cuprina LCUP002659 I 0.000
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.723
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.960
MESCA003521 Megaselia scalaris MESCA003521 I 0.000
MESCA007078 Megaselia scalaris MESCA007078 I 0.730
MESCA007079 Megaselia scalaris MESCA007079 I 0.800
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I 0.974
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.978
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I 0.922
MCINX000302 Melitaea cinxia MCINX000302 I 0.738
MCINX005905 Melitaea cinxia MCINX005905 I 0.000
MCINX005906 Melitaea cinxia MCINX005906 I 0.701
MDOA009046 Musca domestica MDOA009046 I 0.000
MDOA010744 Musca domestica MDOA010744 I 0.708
MDOA013149 Musca domestica MDOA013149 I 0.700
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I 0.885
RUNX2 Myotis lucifugus ENSMLUG00000000514 I 1.000
NV10998 Nasonia vitripennis NV10998 I 0.746
NV11000 Nasonia vitripennis NV11000 I 0.769
NV17759 Nasonia vitripennis NV17759 I 0.000
NV17793 Nasonia vitripennis NV17793 I 0.769
ENSNLEG00000009021 Nomascus leucogenys ENSNLEG00000009021 I 0.967
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I 1.000
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.947
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I 1.000
PHUM333300 Pediculus humanus PHUM333300 I 0.762
PHUM333310 Pediculus humanus PHUM333310 I 0.000
PHUM333320 Pediculus humanus PHUM333320 I 0.762
PHUM333340 Pediculus humanus PHUM333340 I 0.738
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.967
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.708
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.000
RPRC000026 Rhodnius prolixus RPRC000026 I 0.766
RPRC005391 Rhodnius prolixus RPRC005391 I 0.785
ENSSHAG00000012559 Sarcophilus harrisii ENSSHAG00000012559 I 0.978
SINV13317 Solenopsis invicta SINV13317 I 0.785
SINV13356 Solenopsis invicta SINV13356 I 0.000
SINV13363 Solenopsis invicta SINV13363 I 0.762
SINV13405 Solenopsis invicta SINV13405 I 0.000
SMAR009403 Strigamia maritima SMAR009403 I 0.000
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 1.000
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.762
TC005566 Tribolium castaneum TC005566 I 0.769
TC005796 Tribolium castaneum TC005796 I 0.769
TC006536 Tribolium castaneum TC006536 I 0.762
TC006542 Tribolium castaneum TC006542 I 0.723
RUNX2 Tupaia belangeri ENSTBEG00000000948 I 1.000
Tal_R011874 Tyto alba Tal_R011874 I 0.978
L798_10922 Zootermopsis nevadensis L798_10922 I 0.000