SMTD_0000935101 (Schistosoma mattheei)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 SMTD_0000935101 T319845_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_174320
M02457_2.00 		Schistosoma mansoni
NNAACCGCARN
NYTGCGGTTNN		 PBM
Weirauch et al.(2014)
pTH8368 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0000935101-mRNA-1 Runt 11 104

Links

Other Runt family TFs
Other Schistosoma mattheei TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA003304 Oryza indica BGIOSGA003304 N 0.000
ONIVA01G14280 Oryza nivara ONIVA01G14280 N 0.000
OPUNC01G11730 Oryza punctata OPUNC01G11730 N 0.000
ORUFI01G13020 Oryza rufipogon ORUFI01G13020 N 0.000
Pavir.Ab01824 Panicum virgatum Pavir.Ab01824 N 0.000
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.000
Pavir.J14267 Panicum virgatum Pavir.J14267 N 0.000
Si019470m.g Setaria italica Si019470m.g N 0.000
GRMZM5G839969 Zea mays GRMZM5G839969 N 0.000
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.000