GLYMA12G05390 (Glycine max)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 GLYMA12G05390 T320089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G05390.1 RWP-RK 602 650
GLYMA12G05390.2 RWP-RK 602 650
GLYMA12G05390.3 RWP-RK 602 650
GLYMA12G05390.4 RWP-RK 602 650

Links

Other RWP-RK family TFs
Other Glycine max TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000623 N
LBD11 Arabidopsis lyrata fgenesh2_kg.4__820__AT2G28500.1 N
LBD11 Arabidopsis thaliana AT2G28500 N
Bostr.27991s0074 Boechera stricta Bostr.27991s0074 N
Bo01039s010 Brassica oleracea Bo01039s010 N
Bo3g040220 Brassica oleracea Bo3g040220 N
Bo4g165420 Brassica oleracea Bo4g165420 N
Bra011942 Brassica rapa Bra011942 N
Bra035698 Brassica rapa Bra035698 N
PK27389.1 Cannabis sativa PK27389.1 I
Cagra.9128s0007 Capsella grandiflora Cagra.9128s0007 N
Carubv10023989m.g Capsella rubella Carubv10023989m.g N
Carubv10010390m.g Capsella rubella Carubv10010390m.g N
Ca_04287 Cicer arietinum Ca_04287 I
Ca_14605 Cicer arietinum Ca_14605 I
Ciclev10033956m.g Citrus clementina Ciclev10033956m.g I
Ciclev10029283m.g Citrus clementina Ciclev10029283m.g I
orange1.1g047491m.g Citrus sinensis orange1.1g047491m.g I
orange1.1g026556m.g Citrus sinensis orange1.1g026556m.g I
Cucsa.166030 Cucumis sativus Cucsa.166030 N
Thhalv10017165m.g Eutrema salsugineum Thhalv10017165m.g N
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N
GLYMA13G40370 Glycine max GLYMA13G40370 I
GLYMA10G35760 Glycine max GLYMA10G35760 I
GLYMA11G15810 Glycine max GLYMA11G15810 N
GLYMA15G05030 Glycine max GLYMA15G05030 I
GLYMA12G07650 Glycine max GLYMA12G07650 I
Gorai.006G120900 Gossypium raimondii Gorai.006G120900 I
cassava40961.m1 Manihot esculenta cassava40961.m1 I
cassava44959.m1 Manihot esculenta cassava44959.m1 N
cassava819.valid.m1 Manihot esculenta cassava819.valid.m1 I
cassava16668.m1 Manihot esculenta cassava16668.m1 N
cassava11218.m1 Manihot esculenta cassava11218.m1 I
MTR_4g060950 Medicago truncatula MTR_4g060950 I
MTR_1g095850 Medicago truncatula MTR_1g095850 I
Pm018585 Prunus mume Pm018585 I
Pm000938 Prunus mume Pm000938 I
PRUPE_ppa023989mg Prunus persica PRUPE_ppa023989mg I
PRUPE_ppa011528mg Prunus persica PRUPE_ppa011528mg I
PGSC0003DMG400007503 Solanum tuberosum PGSC0003DMG400007503 I
VIT_06s0004g03350 Vitis vinifera VIT_06s0004g03350 I