OB04G24560 (Oryza brachyantha)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OB04G24560 T320555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB04G24560.1 RWP-RK 569 617

Links

Other RWP-RK family TFs
Other Oryza brachyantha TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G44850 Brachypodium distachyon BRADI4G44850 I 0.000
evm.TU.contig_40341.1 Carica papaya evm.TU.contig_40341.1 I 0.000
Ca_13388 Cicer arietinum Ca_13388 I 0.000
Ca_02507 Cicer arietinum Ca_02507 N 0.000
Thhalv10008781m.g Eutrema salsugineum Thhalv10008781m.g N 0.000
GLYMA12G07650 Glycine max GLYMA12G07650 I 0.000
Gorai.004G012800 Gossypium raimondii Gorai.004G012800 I 0.000
Gorai.011G290800 Gossypium raimondii Gorai.011G290800 I 0.000
Lus10040373.g Linum usitatissimum Lus10040373.g I 0.000
GSMUA_Achr3G17800_001 Musa acuminata GSMUA_Achr3G17800_001 N 0.000
ONIVA05G01850 Oryza nivara ONIVA05G01850 I 0.000
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I 0.000
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I 0.000
PDK_20s1595351g001 Phoenix dactylifera PDK_20s1595351g001 N 0.000
Solyc04g050010.1 Solanum lycopersicum Solyc04g050010.1 N 0.000
PGSC0003DMG400027372 Solanum tuberosum PGSC0003DMG400027372 I 0.000
PGSC0003DMG400025400 Solanum tuberosum PGSC0003DMG400025400 I 0.000