GSMUA_Achr10G13120_001 (Musa acuminata)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 GSMUA_Achr10G13120_001 T321381_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P13120_001 S1FA 15 80

Links

Other S1FA family TFs
Other Musa acuminata TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13622 Aegilops tauschii F775_13622 N 0.000
F775_16032 Aegilops tauschii F775_16032 I 0.000
F775_29497 Aegilops tauschii F775_29497 I 0.000
F775_32919 Aegilops tauschii F775_32919 N 0.000
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I 0.000
ANAC087 Arabidopsis thaliana AT5G18270 D 0.000
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I 0.000
Bo9g175670 Brassica oleracea Bo9g175670 I 0.000
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I 0.000
Carubv10001373m.g Capsella rubella Carubv10001373m.g I 0.000
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.000
Ca_08255 Cicer arietinum Ca_08255 I 0.000
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.000
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.000
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.000
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.000
MLOC_72737 Hordeum vulgare MLOC_72737 I 0.000
MLOC_58272 Hordeum vulgare MLOC_58272 N 0.000
MLOC_5374 Hordeum vulgare MLOC_5374 N 0.000
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.000
cassava25877.m1 Manihot esculenta cassava25877.m1 I 0.000
MTR_6g032770 Medicago truncatula MTR_6g032770 I 0.000
MTR_7g085260 Medicago truncatula MTR_7g085260 I 0.000
Pavir.Eb00839 Panicum virgatum Pavir.Eb00839 I 0.000
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.000
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.000
29950.m001171 Ricinus communis 29950.m001171 I 0.000
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I 0.000
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I 0.000
Sb03g008860 Sorghum bicolor Sb03g008860 N 0.000
TCM_026028 Theobroma cacao TCM_026028 I 0.000
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.000
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I 0.000
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.000
TRAES3BF020100130CFD_g Triticum aestivum TRAES3BF020100130CFD_g N 0.000
Traes_7DS_6418D89A3 Triticum aestivum Traes_7DS_6418D89A3 N 0.000
Traes_7DS_2452C1E32 Triticum aestivum Traes_7DS_2452C1E32 I 0.000
Traes_7BS_CF3224FD0 Triticum aestivum Traes_7BS_CF3224FD0 N 0.000
Traes_7BS_BA1111780 Triticum aestivum Traes_7BS_BA1111780 N 0.000
Traes_7AS_CB673ED0C Triticum aestivum Traes_7AS_CB673ED0C N 0.000
Traes_5BL_59AFA4B01 Triticum aestivum Traes_5BL_59AFA4B01 I 0.000
Traes_3DS_3520D86D7 Triticum aestivum Traes_3DS_3520D86D7 N 0.000
TRIUR3_25136 Triticum urartu TRIUR3_25136 I 0.000
TRIUR3_23644 Triticum urartu TRIUR3_23644 I 0.000
GRMZM2G154182 Zea mays GRMZM2G154182 N 0.000