CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_594.1
(
Carica papaya
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
evm.TU.supercontig_594.1
T297882_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.956
0.895
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.956
0.895
anac046
M00884_2.00
Arabidopsis thaliana
NHMCGCMABNN
NNVTKGCGKDN
PBM
Franco-Zorrilla et al.(2014)
ANAC46
0.919
0.877
anac046
M07196_2.00
Arabidopsis thaliana
CKTSHNNHWCAMGYHAH
DTDRCKTGWDNNDSAMG
Dap-seq
OMalley et al.(2016)
ANAC046_colamp_a
0.919
0.877
anac046
M07197_2.00
Arabidopsis thaliana
NNTWNCKTGTNNNDCAMGYHA
TDRCKTGHNNNACAMGNWANN
Dap-seq
OMalley et al.(2016)
ANAC046_col
0.919
0.877
NAC59
M11080_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.889
0.825
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.882
0.825
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.882
0.825
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.882
0.825
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.882
0.825
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.877
0.816
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY
RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.877
0.798
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.877
0.798
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.877
0.798
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.876
0.807
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_594.1
NAC/NAM
18
143
PPGFRFHPTDEEIITHYLTHKVVNSNFTAFAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATEAGYWKATGKDKEIYRGKGCLVGMKKTLVFYRGRAPKGEKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Carica papaya
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava35698.valid.m1
Manihot esculenta
cassava35698.valid.m1
I
0.959
ANAC087
Arabidopsis thaliana
AT5G18270
D
0.956
ANAC087
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001462
I
0.956
Cagra.0906s0022
Capsella grandiflora
Cagra.0906s0022
I
0.955
cassava25877.m1
Manihot esculenta
cassava25877.m1
I
0.955
Carubv10001373m.g
Capsella rubella
Carubv10001373m.g
I
0.955
Gorai.007G267700
Gossypium raimondii
Gorai.007G267700
I
0.955
Bostr.26527s0381
Boechera stricta
Bostr.26527s0381
I
0.955
TCM_026028
Theobroma cacao
TCM_026028
I
0.955
29950.m001171
Ricinus communis
29950.m001171
I
0.954
Thhalv10014060m.g
Eutrema salsugineum
Thhalv10014060m.g
I
0.954
Bo3g013050
Brassica oleracea
Bo3g013050
I
0.953
Bra006449
Brassica rapa
Bra006449
I
0.953
Bo2g015440
Brassica oleracea
Bo2g015440
I
0.953
Bra023669
Brassica rapa
Bra023669
I
0.953
Gorai.013G118000
Gossypium raimondii
Gorai.013G118000
I
0.952
POPTR_0013s05110
Populus trichocarpa
POPTR_0013s05110
I
0.952
Lus10026879.g
Linum usitatissimum
Lus10026879.g
I
0.952
VIT_08s0007g07640
Vitis vinifera
VIT_08s0007g07640
I
0.950
Lus10003435.g
Linum usitatissimum
Lus10003435.g
I
0.949
GLYMA19G28515
Glycine max
GLYMA19G28515
I
0.948
SapurV1A.0867s0130
Salix purpurea
SapurV1A.0867s0130
I
0.947
SapurV1A.1196s0010
Salix purpurea
SapurV1A.1196s0010
I
0.947
GLYMA16G04720
Glycine max
GLYMA16G04720
I
0.946
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
0.946
Ca_08255
Cicer arietinum
Ca_08255
I
0.945
POPTR_0019s04710
Populus trichocarpa
POPTR_0019s04710
I
0.935
MDP0000184069
Malus domestica
MDP0000184069
I
0.933
SapurV1A.2283s0010
Salix purpurea
SapurV1A.2283s0010
I
0.930
SapurV1A.0308s0280
Salix purpurea
SapurV1A.0308s0280
I
0.930
PRUPE_ppa005770mg
Prunus persica
PRUPE_ppa005770mg
I
0.930
Eucgr.A02074
Eucalyptus grandis
Eucgr.A02074
I
0.929
GLYMA02G07760
Glycine max
GLYMA02G07760
I
0.927
GLYMA16G26810
Glycine max
GLYMA16G26810
I
0.927
Bostr.2570s0302
Boechera stricta
Bostr.2570s0302
I
0.925
anac046
Arabidopsis lyrata
fgenesh2_kg.3__366__AT3G04060.1
I
0.925
Thhalv10021125m.g
Eutrema salsugineum
Thhalv10021125m.g
I
0.925
MLOC_72737
Hordeum vulgare
MLOC_72737
I
0.924
Pm025307
Prunus mume
Pm025307
I
0.924
TRIUR3_23644
Triticum urartu
TRIUR3_23644
I
0.924
Pavir.Bb02033
Panicum virgatum
Pavir.Bb02033
I
0.924
Pavir.Ba02955
Panicum virgatum
Pavir.Ba02955
I
0.924
orange1.1g016542m.g
Citrus sinensis
orange1.1g016542m.g
I
0.923
Ciclev10020549m.g
Citrus clementina
Ciclev10020549m.g
I
0.923
TRAES3BF020100120CFD_g
Triticum aestivum
TRAES3BF020100120CFD_g
I
0.922
GSMUA_Achr3G09520_001
Musa acuminata
GSMUA_Achr3G09520_001
I
0.922
GSMUA_Achr5G07600_001
Musa acuminata
GSMUA_Achr5G07600_001
I
0.922
Bra031950
Brassica rapa
Bra031950
I
0.921
Carubv10014118m.g
Capsella rubella
Carubv10014118m.g
I
0.921
Cagra.2026s0002
Capsella grandiflora
Cagra.2026s0002
I
0.921
Traes_3AS_4220612F3
Triticum aestivum
Traes_3AS_4220612F3
I
0.920
Traes_5AL_373E730BB
Triticum aestivum
Traes_5AL_373E730BB
I
0.920
Bo5g148430
Brassica oleracea
Bo5g148430
I
0.919
anac046
Arabidopsis thaliana
AT3G04060
D
0.919
Eucgr.K01472
Eucalyptus grandis
Eucgr.K01472
I
0.918
Cla012339
Citrullus lanatus
Cla012339
I
0.917
F775_16032
Aegilops tauschii
F775_16032
I
0.916
Cucsa.002980
Cucumis sativus
Cucsa.002980
I
0.916
MTR_6g032770
Medicago truncatula
MTR_6g032770
I
0.915
Pavir.Eb00976
Panicum virgatum
Pavir.Eb00976
I
0.915
gene20686-v1.0-hybrid
Fragaria vesca
gene20686-v1.0-hybrid
I
0.913
Traes_5BL_59AFA4B01
Triticum aestivum
Traes_5BL_59AFA4B01
I
0.913
Bra036223
Brassica rapa
Bra036223
I
0.913
MTR_7g085260
Medicago truncatula
MTR_7g085260
I
0.913
Traes_3DS_930F3B5AD
Triticum aestivum
Traes_3DS_930F3B5AD
I
0.912
Ca_19144
Cicer arietinum
Ca_19144
I
0.912
F775_24687
Aegilops tauschii
F775_24687
I
0.912
Pavir.J13094
Panicum virgatum
Pavir.J13094
I
0.911
GSMUA_Achr6G08600_001
Musa acuminata
GSMUA_Achr6G08600_001
I
0.911
Aquca_014_00944
Aquilegia coerulea
Aquca_014_00944
I
0.909
GRMZM2G159500
Zea mays
GRMZM2G159500
I
0.908
Sb01g036590
Sorghum bicolor
Sb01g036590
I
0.908
Bo9g157320
Brassica oleracea
Bo9g157320
I
0.907
Bra002148
Brassica rapa
Bra002148
I
0.907
Bo9g175670
Brassica oleracea
Bo9g175670
I
0.907
OS01G0104500
Oryza sativa
OS01G0104500
I
0.906
GSMUA_Achr7G18330_001
Musa acuminata
GSMUA_Achr7G18330_001
I
0.906
OB01G10300
Oryza brachyantha
OB01G10300
I
0.906
Pavir.Ib01526
Panicum virgatum
Pavir.Ib01526
I
0.903
GSMUA_Achr8G21470_001
Musa acuminata
GSMUA_Achr8G21470_001
I
0.903
GRMZM2G031001
Zea mays
GRMZM2G031001
I
0.903
Si002074m.g
Setaria italica
Si002074m.g
I
0.900
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.898
OBART01G16620
Oryza barthii
OBART01G16620
I
0.898
OBART01G00360
Oryza barthii
OBART01G00360
I
0.898
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.898
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.898
Cla010484
Citrullus lanatus
Cla010484
I
0.898
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.898
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.898
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.898
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.898
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.898
OS01G0393100
Oryza sativa
OS01G0393100
I
0.898
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.898
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.898
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.898
LPERR01G00270
Leersia perrieri
LPERR01G00270
I
0.895
GSMUA_Achr9G16920_001
Musa acuminata
GSMUA_Achr9G16920_001
I
0.895
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.893
Pavir.J27836
Panicum virgatum
Pavir.J27836
N
0.893
GSMUA_Achr6G32290_001
Musa acuminata
GSMUA_Achr6G32290_001
I
0.892
Bra025658
Brassica rapa
Bra025658
I
0.891
Bo00578s090
Brassica oleracea
Bo00578s090
I
0.891
Si030284m.g
Setaria italica
Si030284m.g
N
0.891
BRADI1G63630
Brachypodium distachyon
BRADI1G63630
I
0.890
GLYMA17G10970
Glycine max
GLYMA17G10970
I
0.889
Eucgr.B00529
Eucalyptus grandis
Eucgr.B00529
I
0.889
Bo1g152230
Brassica oleracea
Bo1g152230
I
0.889
Pavir.Eb00839
Panicum virgatum
Pavir.Eb00839
I
0.889
GLYMA05G00930
Glycine max
GLYMA05G00930
I
0.889
NAC59
Arabidopsis thaliana
AT3G29035
D
0.889
Bo6g062160
Brassica oleracea
Bo6g062160
I
0.888
TCM_018621
Theobroma cacao
TCM_018621
I
0.887
Thhalv10027874m.g
Eutrema salsugineum
Thhalv10027874m.g
I
0.886
Bra028435
Brassica rapa
Bra028435
I
0.886
Pavir.J21394
Panicum virgatum
Pavir.J21394
I
0.886
Pavir.J39049
Panicum virgatum
Pavir.J39049
I
0.886
GLYMA06G21020
Glycine max
GLYMA06G21020
I
0.886
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.885
27950.m000105
Ricinus communis
27950.m000105
I
0.885
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.885
TCM_031619
Theobroma cacao
TCM_031619
I
0.885
TRIUR3_00447
Triticum urartu
TRIUR3_00447
N
0.885
TRIUR3_35152
Triticum urartu
TRIUR3_35152
I
0.884
Bra028685
Brassica rapa
Bra028685
I
0.884
Traes_4DL_D84567626
Triticum aestivum
Traes_4DL_D84567626
I
0.884
F775_29256
Aegilops tauschii
F775_29256
I
0.884
Traes_4BL_B92B51F5D
Triticum aestivum
Traes_4BL_B92B51F5D
I
0.884
Traes_4AS_B95A1C3A1
Triticum aestivum
Traes_4AS_B95A1C3A1
I
0.884
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
0.884
GLYMA04G33270
Glycine max
GLYMA04G33270
I
0.884
OPUNC01G00320
Oryza punctata
OPUNC01G00320
I
0.883
gene04424-v1.0-hybrid
Fragaria vesca
gene04424-v1.0-hybrid
I
0.883
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
0.883
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
0.883
ATNAC3
Arabidopsis lyrata
fgenesh2_kg.5__665__AT3G29035.1
I
0.883
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
0.883
Traes_7AL_C8835D919
Triticum aestivum
Traes_7AL_C8835D919
N
0.883
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
0.883
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.882
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.882
ATNAC2
Arabidopsis lyrata
fgenesh2_kg.7__3461__AT5G39610.1
I
0.882
PGSC0003DMG400001338
Solanum tuberosum
PGSC0003DMG400001338
I
0.882
MDP0000310981
Malus domestica
MDP0000310981
I
0.882
Solyc02g088180.2
Solanum lycopersicum
Solyc02g088180.2
I
0.882
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.882
Sb03g008860
Sorghum bicolor
Sb03g008860
N
0.882
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.882
Pm011397
Prunus mume
Pm011397
I
0.882
NAC92
Arabidopsis thaliana
AT5G39610
D
0.882
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.882
Bostr.10058s0039
Boechera stricta
Bostr.10058s0039
I
0.882
Carubv10017737m.g
Capsella rubella
Carubv10017737m.g
I
0.881
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.881
Bra040153
Brassica rapa
Bra040153
I
0.881
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.881
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.881
Pavir.J23199
Panicum virgatum
Pavir.J23199
I
0.880
MDP0000232050
Malus domestica
MDP0000232050
I
0.880
MDP0000129335
Malus domestica
MDP0000129335
I
0.880
TRIUR3_25136
Triticum urartu
TRIUR3_25136
I
0.879
F775_29497
Aegilops tauschii
F775_29497
I
0.879
Si002003m.g
Setaria italica
Si002003m.g
N
0.879
Traes_7AS_7A7A0CF5B
Triticum aestivum
Traes_7AS_7A7A0CF5B
I
0.879
GLYMA13G05540
Glycine max
GLYMA13G05540
I
0.879
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.879
MLOC_64057
Hordeum vulgare
MLOC_64057
N
0.879
Bostr.13129s0198
Boechera stricta
Bostr.13129s0198
I
0.879
Traes_7DS_2452C1E32
Triticum aestivum
Traes_7DS_2452C1E32
I
0.879
PK13860.1
Cannabis sativa
PK13860.1
I
0.878
MTR_3g435150
Medicago truncatula
MTR_3g435150
I
0.878
PRUPE_ppa007653mg
Prunus persica
PRUPE_ppa007653mg
I
0.878
NAC079
Arabidopsis thaliana
AT5G07680
D
0.877
Carubv10001372m.g
Capsella rubella
Carubv10001372m.g
I
0.877
Cagra.2925s0018
Capsella grandiflora
Cagra.2925s0018
I
0.877
Si035639m.g
Setaria italica
Si035639m.g
N
0.877
mgf023988m
Mimulus guttatus
mgf023988m
I
0.877
NAC100
Arabidopsis thaliana
AT5G61430
D
0.877
Thhalv10014081m.g
Eutrema salsugineum
Thhalv10014081m.g
I
0.877
ANAC080
Arabidopsis lyrata
fgenesh2_kg.6__736__AT5G07680.1
D
0.876
Pm024887
Prunus mume
Pm024887
I
0.876
Traes_7AL_38B48B7B2
Triticum aestivum
Traes_7AL_38B48B7B2
N
0.876
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.876
evm.TU.supercontig_111.22
Carica papaya
evm.TU.supercontig_111.22
I
0.876
Thhalv10004583m.g
Eutrema salsugineum
Thhalv10004583m.g
I
0.875
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.875
Carubv10005201m.g
Capsella rubella
Carubv10005201m.g
I
0.875
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.875
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.875
OMERI03G14250
Oryza meridionalis
OMERI03G14250
N
0.874
Gorai.007G038100
Gossypium raimondii
Gorai.007G038100
I
0.874
Bostr.26833s0095
Boechera stricta
Bostr.26833s0095
I
0.874
TCM_014073
Theobroma cacao
TCM_014073
I
0.874
Traes_7BS_BA1111780
Triticum aestivum
Traes_7BS_BA1111780
N
0.874
Gorai.008G194400
Gossypium raimondii
Gorai.008G194400
I
0.874
28649.m000212
Ricinus communis
28649.m000212
I
0.873
Bra022685
Brassica rapa
Bra022685
I
0.873
MDP0000911724
Malus domestica
MDP0000911724
I
0.873
Bo2g043280
Brassica oleracea
Bo2g043280
I
0.873
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
0.873
GRMZM2G154182
Zea mays
GRMZM2G154182
N
0.872
chr4.CM0087.800.nd
Lotus japonicus
chr4.CM0087.800.nd
I
0.872
Traes_7BL_2782B04F1
Triticum aestivum
Traes_7BL_2782B04F1
N
0.872
PK26741.1
Cannabis sativa
PK26741.1
I
0.872
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
0.871
GSMUA_Achr10G05070_001
Musa acuminata
GSMUA_Achr10G05070_001
I
0.871
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.871
Bra025374
Brassica rapa
Bra025374
I
0.871
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
0.871
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
0.871
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.870