Pavir.Eb00976 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Eb00976 T298832_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC087
M07232_2.00 		Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA		 Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a 		0.894 0.702
ANAC087
M07233_2.00 		Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a 		0.894 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb00976.1.p NAC/NAM 21 151

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J27836 Panicum virgatum Pavir.J27836 N 0.953
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.944
Si002074m.g Setaria italica Si002074m.g I 0.944
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.933
Pavir.Eb00839 Panicum virgatum Pavir.Eb00839 I 0.926
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.925
Si002003m.g Setaria italica Si002003m.g N 0.922
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.915
MLOC_72737 Hordeum vulgare MLOC_72737 I 0.915
TRIUR3_23644 Triticum urartu TRIUR3_23644 I 0.914
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.911
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.911
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.911
Ca_08255 Cicer arietinum Ca_08255 I 0.910
OS01G0104500 Oryza sativa OS01G0104500 I 0.909
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I 0.909
OB01G10300 Oryza brachyantha OB01G10300 I 0.909
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I 0.908
GSMUA_Achr3G09520_001 Musa acuminata GSMUA_Achr3G09520_001 I 0.908
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.908
Si030284m.g Setaria italica Si030284m.g N 0.908
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.905
TCM_026028 Theobroma cacao TCM_026028 I 0.905
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.904
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I 0.902
Cla012339 Citrullus lanatus Cla012339 I 0.902
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.902
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.902
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.901
Traes_3DS_930F3B5AD Triticum aestivum Traes_3DS_930F3B5AD I 0.901
F775_24687 Aegilops tauschii F775_24687 I 0.901
ANAC087 Arabidopsis thaliana AT5G18270 D 0.900
29950.m001171 Ricinus communis 29950.m001171 I 0.899
ONIVA01G00280 Oryza nivara ONIVA01G00280 I 0.898
ONIVA01G18370 Oryza nivara ONIVA01G18370 I 0.898
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I 0.898
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I 0.898
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I 0.898
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I 0.898
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I 0.898
BGIOSGA002597 Oryza indica BGIOSGA002597 I 0.898
BGIOSGA001578 Oryza indica BGIOSGA001578 I 0.898
OBART01G00360 Oryza barthii OBART01G00360 I 0.898
OBART01G16620 Oryza barthii OBART01G16620 I 0.898
OLONG_022415 Oryza longistaminata OLONG_022415 I 0.898
OS01G0393100 Oryza sativa OS01G0393100 I 0.898
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I 0.898
OMERI01G15230 Oryza meridionalis OMERI01G15230 I 0.898
F775_16032 Aegilops tauschii F775_16032 I 0.897
BRADI1G63630 Brachypodium distachyon BRADI1G63630 I 0.896
Bo2g015440 Brassica oleracea Bo2g015440 I 0.894
Bra023669 Brassica rapa Bra023669 I 0.894
cassava25877.m1 Manihot esculenta cassava25877.m1 I 0.894
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I 0.894
Traes_4DL_D84567626 Triticum aestivum Traes_4DL_D84567626 I 0.894
F775_29256 Aegilops tauschii F775_29256 I 0.894
Bo3g013050 Brassica oleracea Bo3g013050 I 0.894
Carubv10001373m.g Capsella rubella Carubv10001373m.g I 0.894
Bra006449 Brassica rapa Bra006449 I 0.894
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I 0.894
Lus10026879.g Linum usitatissimum Lus10026879.g I 0.894
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I 0.894
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I 0.893
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I 0.893
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I 0.893
Traes_5BL_59AFA4B01 Triticum aestivum Traes_5BL_59AFA4B01 I 0.893
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I 0.893
OMERI01G15210 Oryza meridionalis OMERI01G15210 I 0.893
MDP0000184069 Malus domestica MDP0000184069 I 0.892
GSMUA_Achr9G16920_001 Musa acuminata GSMUA_Achr9G16920_001 I 0.892
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I 0.892
GSMUA_Achr6G32290_001 Musa acuminata GSMUA_Achr6G32290_001 I 0.892
SapurV1A.1196s0010 Salix purpurea SapurV1A.1196s0010 I 0.891
PRUPE_ppa005770mg Prunus persica PRUPE_ppa005770mg I 0.891
SapurV1A.0867s0130 Salix purpurea SapurV1A.0867s0130 I 0.891
Traes_4BL_B92B51F5D Triticum aestivum Traes_4BL_B92B51F5D I 0.890
POPTR_0013s05110 Populus trichocarpa POPTR_0013s05110 I 0.889
VIT_08s0007g07640 Vitis vinifera VIT_08s0007g07640 I 0.889
MLOC_64057 Hordeum vulgare MLOC_64057 N 0.889
orange1.1g016542m.g Citrus sinensis orange1.1g016542m.g I 0.887
Lus10003435.g Linum usitatissimum Lus10003435.g I 0.887
Ciclev10020549m.g Citrus clementina Ciclev10020549m.g I 0.887
Pavir.J13094 Panicum virgatum Pavir.J13094 I 0.886
Pm025307 Prunus mume Pm025307 I 0.886
GLYMA02G07760 Glycine max GLYMA02G07760 I 0.884
GSMUA_Achr7G18330_001 Musa acuminata GSMUA_Achr7G18330_001 I 0.884
TRIUR3_35152 Triticum urartu TRIUR3_35152 I 0.884
Traes_4AS_B95A1C3A1 Triticum aestivum Traes_4AS_B95A1C3A1 I 0.884
GLYMA16G26810 Glycine max GLYMA16G26810 I 0.884
GRMZM2G031001 Zea mays GRMZM2G031001 I 0.883
GRMZM2G159500 Zea mays GRMZM2G159500 I 0.883
OPUNC01G00320 Oryza punctata OPUNC01G00320 I 0.883
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I 0.882
Bo9g175670 Brassica oleracea Bo9g175670 I 0.882
Traes_7AL_C8835D919 Triticum aestivum Traes_7AL_C8835D919 N 0.881
Pavir.Ib01526 Panicum virgatum Pavir.Ib01526 I 0.881
TRIUR3_00447 Triticum urartu TRIUR3_00447 N 0.881
LPERR01G00270 Leersia perrieri LPERR01G00270 I 0.881
Sb01g036590 Sorghum bicolor Sb01g036590 I 0.879
MTR_7g085260 Medicago truncatula MTR_7g085260 I 0.878
Traes_7AL_38B48B7B2 Triticum aestivum Traes_7AL_38B48B7B2 N 0.876
Traes_7BS_BA1111780 Triticum aestivum Traes_7BS_BA1111780 N 0.876
Sb03g008860 Sorghum bicolor Sb03g008860 N 0.876
Ca_11021 Cicer arietinum Ca_11021 I 0.875
OPUNC03G15440 Oryza punctata OPUNC03G15440 N 0.874
MTR_6g032770 Medicago truncatula MTR_6g032770 I 0.873
Eucgr.K01472 Eucalyptus grandis Eucgr.K01472 I 0.872
Carubv10017737m.g Capsella rubella Carubv10017737m.g I 0.871
OMERI03G14250 Oryza meridionalis OMERI03G14250 N 0.871