CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G159500
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G159500
T293258_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.897
0.789
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.897
0.789
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G159500_P01
NAC/NAM
23
148
PPGFRFHPTDEEIISHYLAHKALNHRFVSGVIGEVDLNKCEPWDLPGRAKMGEKEWYFFCHKDRKYPTGTRTNRATETGYWKATGKDKEIFRGRGVLVGMKKTLVFYRGRAPRGEKTGWVMHEFRL
GRMZM2G159500_P02
NAC/NAM
23
148
PPGFRFHPTDEEIISHYLAHKALNHRFVSGVIGEVDLNKCEPWDLPGRAKMGEKEWYFFCHKDRKYPTGTRTNRATETGYWKATGKDKEIFRGRGVLVGMKKTLVFYRGRAPRGEKTGWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb01g036590
Sorghum bicolor
Sb01g036590
I
0.973
Pavir.Ib01526
Panicum virgatum
Pavir.Ib01526
I
0.970
GRMZM2G031001
Zea mays
GRMZM2G031001
I
0.969
Pavir.J13094
Panicum virgatum
Pavir.J13094
I
0.967
Si035639m.g
Setaria italica
Si035639m.g
N
0.963
F775_29256
Aegilops tauschii
F775_29256
I
0.962
Traes_4DL_D84567626
Triticum aestivum
Traes_4DL_D84567626
I
0.962
Traes_4BL_B92B51F5D
Triticum aestivum
Traes_4BL_B92B51F5D
I
0.960
MLOC_64057
Hordeum vulgare
MLOC_64057
N
0.959
Traes_4AS_B95A1C3A1
Triticum aestivum
Traes_4AS_B95A1C3A1
I
0.958
TRIUR3_35152
Triticum urartu
TRIUR3_35152
I
0.958
BRADI1G63630
Brachypodium distachyon
BRADI1G63630
I
0.957
OPUNC03G15440
Oryza punctata
OPUNC03G15440
N
0.955
OMERI03G14250
Oryza meridionalis
OMERI03G14250
N
0.953
BGIOSGA010816
Oryza indica
BGIOSGA010816
N
0.937
OBART03G15920
Oryza barthii
OBART03G15920
N
0.937
OGLUM03G16080
Oryza glumaepatula
OGLUM03G16080
N
0.937
OLONG_022063
Oryza longistaminata
OLONG_022063
N
0.937
ONIVA03G16900
Oryza nivara
ONIVA03G16900
N
0.937
ORGLA03G0152400
Oryza glaberrima
ORGLA03G0152400
N
0.937
ORUFI03G16480
Oryza rufipogon
ORUFI03G16480
N
0.937
OS03G0327100
Oryza sativa
OS03G0327100
N
0.937
LPERR03G13930
Leersia perrieri
LPERR03G13930
N
0.926
GSMUA_Achr3G09520_001
Musa acuminata
GSMUA_Achr3G09520_001
I
0.920
GSMUA_Achr5G07600_001
Musa acuminata
GSMUA_Achr5G07600_001
I
0.919
Pavir.Ba02955
Panicum virgatum
Pavir.Ba02955
I
0.912
evm.TU.supercontig_594.1
Carica papaya
evm.TU.supercontig_594.1
I
0.908
Pavir.Bb02033
Panicum virgatum
Pavir.Bb02033
I
0.905
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
0.904
Ca_08255
Cicer arietinum
Ca_08255
I
0.903
gene20686-v1.0-hybrid
Fragaria vesca
gene20686-v1.0-hybrid
I
0.903
GLYMA19G28515
Glycine max
GLYMA19G28515
I
0.902
GSMUA_Achr8G21470_001
Musa acuminata
GSMUA_Achr8G21470_001
I
0.902
Bostr.26527s0381
Boechera stricta
Bostr.26527s0381
I
0.900
Cagra.0906s0022
Capsella grandiflora
Cagra.0906s0022
I
0.899
Carubv10001373m.g
Capsella rubella
Carubv10001373m.g
I
0.899
F775_15511
Aegilops tauschii
F775_15511
N
0.898
GLYMA16G04720
Glycine max
GLYMA16G04720
I
0.898
MLOC_65400
Hordeum vulgare
MLOC_65400
N
0.898
Traes_2AS_7AAACC26B
Triticum aestivum
Traes_2AS_7AAACC26B
N
0.898
Traes_2BS_00566A85C
Triticum aestivum
Traes_2BS_00566A85C
N
0.898
TRIUR3_20284
Triticum urartu
TRIUR3_20284
N
0.898
ANAC087
Arabidopsis thaliana
AT5G18270
D
0.897
ANAC087
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001462
I
0.897
GSMUA_Achr6G08600_001
Musa acuminata
GSMUA_Achr6G08600_001
I
0.897
GSMUA_Achr6G32290_001
Musa acuminata
GSMUA_Achr6G32290_001
I
0.897
GSMUA_Achr9G16920_001
Musa acuminata
GSMUA_Achr9G16920_001
I
0.896
Bo2g015440
Brassica oleracea
Bo2g015440
I
0.895
Bo3g013050
Brassica oleracea
Bo3g013050
I
0.895
Bra006449
Brassica rapa
Bra006449
I
0.895
Bra023669
Brassica rapa
Bra023669
I
0.895
TRIUR3_14541
Triticum urartu
TRIUR3_14541
N
0.895
Cla012339
Citrullus lanatus
Cla012339
I
0.895
cassava25877.m1
Manihot esculenta
cassava25877.m1
I
0.895
GSMUA_Achr10G05070_001
Musa acuminata
GSMUA_Achr10G05070_001
I
0.893
Thhalv10014060m.g
Eutrema salsugineum
Thhalv10014060m.g
I
0.893
Sb02g043270
Sorghum bicolor
Sb02g043270
N
0.892
TCM_026028
Theobroma cacao
TCM_026028
I
0.891
Eucgr.A02074
Eucalyptus grandis
Eucgr.A02074
I
0.891
Gorai.007G267700
Gossypium raimondii
Gorai.007G267700
I
0.891
Cucsa.002980
Cucumis sativus
Cucsa.002980
I
0.890
MLOC_5832
Hordeum vulgare
MLOC_5832
N
0.887
Traes_5BL_420974D47
Triticum aestivum
Traes_5BL_420974D47
N
0.887
GLYMA02G07760
Glycine max
GLYMA02G07760
I
0.886
GLYMA16G26810
Glycine max
GLYMA16G26810
I
0.886
29950.m001171
Ricinus communis
29950.m001171
I
0.885
SapurV1A.0308s0280
Salix purpurea
SapurV1A.0308s0280
I
0.885
SapurV1A.2283s0010
Salix purpurea
SapurV1A.2283s0010
I
0.885
LPERR01G00270
Leersia perrieri
LPERR01G00270
I
0.883
Pavir.Eb00976
Panicum virgatum
Pavir.Eb00976
I
0.883
Pavir.J21394
Panicum virgatum
Pavir.J21394
I
0.881
Pavir.J39049
Panicum virgatum
Pavir.J39049
I
0.881
VIT_08s0007g07640
Vitis vinifera
VIT_08s0007g07640
I
0.880
Gorai.013G118000
Gossypium raimondii
Gorai.013G118000
I
0.880
PRUPE_ppa005770mg
Prunus persica
PRUPE_ppa005770mg
I
0.879
SapurV1A.0867s0130
Salix purpurea
SapurV1A.0867s0130
I
0.879
SapurV1A.1196s0010
Salix purpurea
SapurV1A.1196s0010
I
0.879
POPTR_0013s05110
Populus trichocarpa
POPTR_0013s05110
I
0.878
cassava35698.valid.m1
Manihot esculenta
cassava35698.valid.m1
I
0.878
F775_26964
Aegilops tauschii
F775_26964
N
0.877
OB01G10300
Oryza brachyantha
OB01G10300
I
0.877
OB07G32150
Oryza brachyantha
OB07G32150
N
0.877
OS01G0104500
Oryza sativa
OS01G0104500
I
0.877
OPUNC01G00320
Oryza punctata
OPUNC01G00320
I
0.876
POPTR_0019s04710
Populus trichocarpa
POPTR_0019s04710
I
0.876
TRAES3BF020100120CFD_g
Triticum aestivum
TRAES3BF020100120CFD_g
I
0.876