CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_3DS_930F3B5AD
(
Triticum aestivum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Traes_3DS_930F3B5AD
T296132_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.889
0.728
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.889
0.728
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.876
0.772
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.876
0.772
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.876
0.772
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.876
0.772
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_3DS_930F3B5AD.2
NAC/NAM
17
144
PPGYRFHPTDEEIITSYLAPKILNPAFDATAIGEVDVNKNEPWELPKKAKMGENEWYFYCQKDRKYPTGIRTNQATKAGYWKTTGKDKEIVNPHCTSMLIGMKKTLVFYKGRAPSGEKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Triticum aestivum
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_24687
Aegilops tauschii
F775_24687
I
0.973
Traes_3AS_4220612F3
Triticum aestivum
Traes_3AS_4220612F3
I
0.966
TRIUR3_23644
Triticum urartu
TRIUR3_23644
I
0.964
TRAES3BF020100120CFD_g
Triticum aestivum
TRAES3BF020100120CFD_g
I
0.962
MLOC_72737
Hordeum vulgare
MLOC_72737
I
0.960
Traes_5AL_373E730BB
Triticum aestivum
Traes_5AL_373E730BB
I
0.934
F775_16032
Aegilops tauschii
F775_16032
I
0.932
Traes_5BL_59AFA4B01
Triticum aestivum
Traes_5BL_59AFA4B01
I
0.930
Cla012339
Citrullus lanatus
Cla012339
I
0.916
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
0.914
Ca_08255
Cicer arietinum
Ca_08255
I
0.913
evm.TU.supercontig_594.1
Carica papaya
evm.TU.supercontig_594.1
I
0.912
GLYMA16G04720
Glycine max
GLYMA16G04720
I
0.911
Pavir.Ba02955
Panicum virgatum
Pavir.Ba02955
I
0.911
Pavir.Bb02033
Panicum virgatum
Pavir.Bb02033
I
0.910
GLYMA19G28515
Glycine max
GLYMA19G28515
I
0.907
Eucgr.A02074
Eucalyptus grandis
Eucgr.A02074
I
0.904
Pavir.Eb00976
Panicum virgatum
Pavir.Eb00976
I
0.901
TCM_026028
Theobroma cacao
TCM_026028
I
0.900
Gorai.007G267700
Gossypium raimondii
Gorai.007G267700
I
0.900
GSMUA_Achr9G16920_001
Musa acuminata
GSMUA_Achr9G16920_001
I
0.899
TRIUR3_11787
Triticum urartu
TRIUR3_11787
N
0.899
Eucgr.K01472
Eucalyptus grandis
Eucgr.K01472
I
0.899
GSMUA_Achr3G09520_001
Musa acuminata
GSMUA_Achr3G09520_001
I
0.898
POPTR_0019s04710
Populus trichocarpa
POPTR_0019s04710
I
0.898
cassava35698.valid.m1
Manihot esculenta
cassava35698.valid.m1
I
0.898
Pavir.J27836
Panicum virgatum
Pavir.J27836
N
0.897
GLYMA02G07760
Glycine max
GLYMA02G07760
I
0.896
GLYMA16G26810
Glycine max
GLYMA16G26810
I
0.896
GSMUA_Achr5G07600_001
Musa acuminata
GSMUA_Achr5G07600_001
I
0.896
29950.m001171
Ricinus communis
29950.m001171
I
0.895
Gorai.013G118000
Gossypium raimondii
Gorai.013G118000
I
0.894
Cucsa.002980
Cucumis sativus
Cucsa.002980
I
0.893
MDP0000184069
Malus domestica
MDP0000184069
I
0.893
ANAC087
Arabidopsis thaliana
AT5G18270
D
0.889
Bo9g175670
Brassica oleracea
Bo9g175670
I
0.889
ANAC087
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001462
I
0.889
OS01G0104500
Oryza sativa
OS01G0104500
I
0.889
cassava25877.m1
Manihot esculenta
cassava25877.m1
I
0.889
TRIUR3_00447
Triticum urartu
TRIUR3_00447
N
0.888
Bostr.26527s0381
Boechera stricta
Bostr.26527s0381
I
0.888
Cagra.0906s0022
Capsella grandiflora
Cagra.0906s0022
I
0.888
Carubv10001373m.g
Capsella rubella
Carubv10001373m.g
I
0.888
SapurV1A.0308s0280
Salix purpurea
SapurV1A.0308s0280
I
0.888
SapurV1A.2283s0010
Salix purpurea
SapurV1A.2283s0010
I
0.888
Traes_7AL_C8835D919
Triticum aestivum
Traes_7AL_C8835D919
N
0.886
POPTR_0013s05110
Populus trichocarpa
POPTR_0013s05110
I
0.885
Bo2g015440
Brassica oleracea
Bo2g015440
I
0.884
Bo3g013050
Brassica oleracea
Bo3g013050
I
0.884
Bra006449
Brassica rapa
Bra006449
I
0.884
Bra023669
Brassica rapa
Bra023669
I
0.884
Ciclev10020549m.g
Citrus clementina
Ciclev10020549m.g
I
0.884
orange1.1g016542m.g
Citrus sinensis
orange1.1g016542m.g
I
0.884
Pavir.Eb00839
Panicum virgatum
Pavir.Eb00839
I
0.884
Thhalv10014060m.g
Eutrema salsugineum
Thhalv10014060m.g
I
0.884
Traes_7AL_38B48B7B2
Triticum aestivum
Traes_7AL_38B48B7B2
N
0.883
Si002003m.g
Setaria italica
Si002003m.g
N
0.882
Si002074m.g
Setaria italica
Si002074m.g
I
0.882
PRUPE_ppa005770mg
Prunus persica
PRUPE_ppa005770mg
I
0.881
VIT_08s0007g07640
Vitis vinifera
VIT_08s0007g07640
I
0.880
Ca_19144
Cicer arietinum
Ca_19144
I
0.879
Lus10026879.g
Linum usitatissimum
Lus10026879.g
I
0.879
OB01G10300
Oryza brachyantha
OB01G10300
I
0.878
Bra028435
Brassica rapa
Bra028435
I
0.877
MTR_6g032770
Medicago truncatula
MTR_6g032770
I
0.877
MTR_7g085260
Medicago truncatula
MTR_7g085260
I
0.877
Thhalv10027874m.g
Eutrema salsugineum
Thhalv10027874m.g
I
0.877
NAC92
Arabidopsis thaliana
AT5G39610
D
0.876
ATNAC2
Arabidopsis lyrata
fgenesh2_kg.7__3461__AT5G39610.1
I
0.876
GSMUA_Achr7G18330_001
Musa acuminata
GSMUA_Achr7G18330_001
I
0.876
Traes_7BS_BA1111780
Triticum aestivum
Traes_7BS_BA1111780
N
0.876
Bostr.10058s0039
Boechera stricta
Bostr.10058s0039
I
0.876
Bo00578s090
Brassica oleracea
Bo00578s090
I
0.875
Bra025658
Brassica rapa
Bra025658
I
0.875
Pm025307
Prunus mume
Pm025307
I
0.875
SapurV1A.0867s0130
Salix purpurea
SapurV1A.0867s0130
I
0.875
SapurV1A.1196s0010
Salix purpurea
SapurV1A.1196s0010
I
0.875
GSMUA_Achr8G21470_001
Musa acuminata
GSMUA_Achr8G21470_001
I
0.873
Traes_7BL_2782B04F1
Triticum aestivum
Traes_7BL_2782B04F1
N
0.873
Pavir.J21394
Panicum virgatum
Pavir.J21394
I
0.873
Lus10003435.g
Linum usitatissimum
Lus10003435.g
I
0.872
Pavir.J39049
Panicum virgatum
Pavir.J39049
I
0.872