Pavir.Eb00839 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.Eb00839 T298830_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.871 0.719
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb00839.1.p NAC/NAM 20 150

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb02033 Panicum virgatum Pavir.Bb02033 I 0.941
Si002003m.g Setaria italica Si002003m.g N 0.940
Si002074m.g Setaria italica Si002074m.g I 0.936
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.933
Pavir.J27836 Panicum virgatum Pavir.J27836 N 0.927
Pavir.Eb00976 Panicum virgatum Pavir.Eb00976 I 0.926
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.917
F775_16032 Aegilops tauschii F775_16032 I 0.913
Traes_5BL_59AFA4B01 Triticum aestivum Traes_5BL_59AFA4B01 I 0.910
TRAES3BF020100120CFD_g Triticum aestivum TRAES3BF020100120CFD_g I 0.907
MLOC_72737 Hordeum vulgare MLOC_72737 I 0.900
Si030284m.g Setaria italica Si030284m.g N 0.899
TRIUR3_23644 Triticum urartu TRIUR3_23644 I 0.899
Traes_3AS_4220612F3 Triticum aestivum Traes_3AS_4220612F3 I 0.893
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.889
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.887
TRIUR3_25136 Triticum urartu TRIUR3_25136 I 0.887
F775_29497 Aegilops tauschii F775_29497 I 0.887
Traes_7DS_2452C1E32 Triticum aestivum Traes_7DS_2452C1E32 I 0.887
Traes_7AS_7A7A0CF5B Triticum aestivum Traes_7AS_7A7A0CF5B I 0.887
F775_24687 Aegilops tauschii F775_24687 I 0.884
Traes_3DS_930F3B5AD Triticum aestivum Traes_3DS_930F3B5AD I 0.884
OS01G0104500 Oryza sativa OS01G0104500 I 0.883
TRIUR3_11787 Triticum urartu TRIUR3_11787 N 0.883
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.883
OB01G10300 Oryza brachyantha OB01G10300 I 0.883
Bo9g175670 Brassica oleracea Bo9g175670 I 0.882
ONIVA01G18370 Oryza nivara ONIVA01G18370 I 0.880
OGLUM01G00350 Oryza glumaepatula OGLUM01G00350 I 0.880
OGLUM01G19440 Oryza glumaepatula OGLUM01G19440 I 0.880
OBART01G16620 Oryza barthii OBART01G16620 I 0.880
OBART01G00360 Oryza barthii OBART01G00360 I 0.880
BGIOSGA001578 Oryza indica BGIOSGA001578 I 0.880
BGIOSGA002597 Oryza indica BGIOSGA002597 I 0.880
OLONG_022415 Oryza longistaminata OLONG_022415 I 0.880
OS01G0393100 Oryza sativa OS01G0393100 I 0.880
ORGLA12G0187900 Oryza glaberrima ORGLA12G0187900 I 0.880
ORUFI01G18470 Oryza rufipogon ORUFI01G18470 I 0.880
ONIVA01G00280 Oryza nivara ONIVA01G00280 I 0.880
OMERI01G15230 Oryza meridionalis OMERI01G15230 I 0.880
ORUFI01G00320 Oryza rufipogon ORUFI01G00320 I 0.880
Carubv10017737m.g Capsella rubella Carubv10017737m.g I 0.879
Cla010484 Citrullus lanatus Cla010484 I 0.878
Pavir.Ea00746 Panicum virgatum Pavir.Ea00746 N 0.877
Sb03g008860 Sorghum bicolor Sb03g008860 N 0.876
OMERI01G15210 Oryza meridionalis OMERI01G15210 I 0.875
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.875
Eucgr.A02074 Eucalyptus grandis Eucgr.A02074 I 0.875
Traes_7BS_BA1111780 Triticum aestivum Traes_7BS_BA1111780 N 0.874
Ca_08255 Cicer arietinum Ca_08255 I 0.874
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.874
ANAC087 Arabidopsis thaliana AT5G18270 D 0.873
MDP0000129335 Malus domestica MDP0000129335 I 0.871
ATNAC3 Arabidopsis lyrata fgenesh2_kg.5__665__AT3G29035.1 I 0.871
MDP0000232050 Malus domestica MDP0000232050 I 0.871
NAC59 Arabidopsis thaliana AT3G29035 D 0.871