gmeb1 (Danio rerio)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSDARG00000062060 T321664_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.965 0.811
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.965 0.811
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.965 0.811
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.965 0.811
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.965 0.811
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.965 0.811
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.965 0.797
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.960 0.770
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.960 0.757
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.947 0.716
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.942 0.689
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.942 0.689
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.942 0.689
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.942 0.689
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.942 0.689
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.942 0.689
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.942 0.689
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.940 0.689
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.884 0.595
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000122476 SAND 70 144
ENSDARP00000125781 SAND 70 144

Links

Other SAND family TFs
Other Danio rerio TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI32234 Acyrthosiphon pisum ACYPI32234 I 0.000
AAEL009442 Aedes aegypti AAEL009442 I 0.000
ENSAMEG00000001342 Ailuropoda melanoleuca ENSAMEG00000001342 I 0.000
ENSAMEG00000017284 Ailuropoda melanoleuca ENSAMEG00000017284 I 0.000
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.000
Alligator_sinensis_CCG002912.1 Alligator sinensis Alligator_sinensis_CCG002912.1 I 0.000
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.000
ENSAPLG00000012304 Anas platyrhynchos ENSAPLG00000012304 I 0.000
ATF3 Anolis carolinensis ENSACAG00000006353 I 0.000
FOSL1 Anolis carolinensis ENSACAG00000010103 I 0.000
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.000
AALB009141 Anopheles albimanus AALB009141 I 0.000
AARA001983 Anopheles arabiensis AARA001983 I 0.000
AATE020966 Anopheles atroparvus AATE020966 I 0.000
ACUA018111 Anopheles culicifacies ACUA018111 I 0.000
ADIR009888 Anopheles dirus ADIR009888 I 0.000
AEPI006169 Anopheles epiroticus AEPI006169 I 0.000
AFAF020202 Anopheles farauti AFAF020202 I 0.000
AFUN001209 Anopheles funestus AFUN001209 I 0.000
AMEM000126 Anopheles merus AMEM000126 I 0.000
AMIN002428 Anopheles minimus AMIN002428 I 0.000
ASIS002535 Anopheles sinensis ASIS002535 I 0.000
ASTEI05449 Anopheles stephensi ASTEI05449 I 0.000
GB53401 Apis mellifera GB53401 I 0.000
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.000
Afo_R004731 Aptenodytes forsteri Afo_R004731 I 0.000
ENSAMXG00000010494 Astyanax mexicanus ENSAMXG00000010494 I 0.000
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I 0.000
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.000
ENSBTAP00000011265-D1 Bos grunniens ENSBTAP00000011265-D1 I 0.000
ATF3 Bos taurus ENSBTAG00000008545 I 0.000
JDP2 Bos taurus ENSBTAG00000009451 I 0.000
Brh_R009866 Buceros rhinoceros Brh_R009866 I 0.000
Brh_R010146 Buceros rhinoceros Brh_R010146 I 0.000
ATF3 Callithrix jacchus ENSCJAG00000015735 I 0.000
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.000
Aan_R000237 Calypte anna Aan_R000237 I 0.000
Aan_R005677 Calypte anna Aan_R005677 I 0.000
Aan_R011482 Calypte anna Aan_R011482 I 0.000
Cflo_05052--XP_392513.1_APIME Camponotus floridanus Cflo_05052--XP_392513.1_APIME I 0.000
ATF3 Canis familiaris ENSCAFG00000012339 I 0.000
JDP2 Canis familiaris ENSCAFG00000017042 I 0.000
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.000
ENSCPOG00000019424 Cavia porcellus ENSCPOG00000019424 I 0.000
Cmyd_10020806 Chelonia mydas Cmyd_10020806 I 0.000
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.000
ENSCSAG00000015405 Chlorocebus sabaeus ENSCSAG00000015405 I 0.000
ATF3 Choloepus hoffmanni ENSCHOG00000010259 I 0.000
CLEC002857 Cimex lectularius CLEC002857 I 0.000
ENSCING00000002838 Ciona intestinalis ENSCING00000002838 I 0.000
ENSCSAVG00000000153 Ciona savignyi ENSCSAVG00000000153 I 0.000
CpipJ_CPIJ001204 Culex pipiens CpipJ_CPIJ001204 I 0.000
CPIJ001204 Culex quinquefasciatus CPIJ001204 I 0.000
KGM_03513 Danaus plexippus KGM_03513 I 0.000
atf3 Danio rerio ENSDARG00000007823 I 0.000
jdp2b Danio rerio ENSDARG00000020133 I 0.000
jdp2a Danio rerio ENSDARG00000040137 I 0.000
DAPPUDRAFT_222762 Daphnia pulex DAPPUDRAFT_222762 I 0.000
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.000
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I 0.000
YQE_04190 Dendroctonus ponderosae YQE_04190 I 0.000
ENSDORG00000006025 Dipodomys ordii ENSDORG00000006025 I 0.000
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.000
GG12710 Drosophila erecta FBgn0104997 I 0.000
GH24925 Drosophila grimshawi FBgn0132380 I 0.000
Atf3 Drosophila melanogaster FBgn0028550 D 0.000
GI21781 Drosophila mojavensis FBgn0144511 I 0.000
GL14394 Drosophila persimilis FBgn0151999 I 0.000
GA10981 Drosophila pseudoobscura FBgn0071037 I 0.000
GM18988 Drosophila sechellia FBgn0173891 I 0.000
GD16430 Drosophila simulans FBgn0188046 I 0.000
GJ16954 Drosophila virilis FBgn0204132 I 0.000
GK19912 Drosophila willistoni FBgn0221909 I 0.000
GE16537 Drosophila yakuba FBgn0234052 I 0.000
ATF3 Echinops telfairi ENSETEG00000015701 I 0.000
ATF3 Equus caballus ENSECAG00000011486 I 0.000
JDP2 Equus caballus ENSECAG00000014862 I 0.000
ATF3 Erinaceus europaeus ENSEEUG00000010993 I 0.000
JDP2 Felis catus ENSFCAG00000029464 I 0.000
ATF3 Felis catus ENSFCAG00000029636 I 0.000
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.000
ENSFALG00000012408 Ficedula albicollis ENSFALG00000012408 I 0.000
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I 0.000
ENSGMOG00000015382 Gadus morhua ENSGMOG00000015382 I 0.000
ENSGMOG00000016268 Gadus morhua ENSGMOG00000016268 I 0.000
JDP2 Gallus gallus ENSGALG00000010322 I 0.000
ATF3 Gallus gallus ENSGALG00000025887 I 0.000
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I 0.000
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I 0.000
atf3 Gasterosteus aculeatus ENSGACG00000011997 I 0.000
Gfo_R010939 Geospiza fortis Gfo_R010939 I 0.000
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.000
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.000
ATF3 Gorilla gorilla ENSGGOG00000014206 I 0.000
Hsal_14793--XP_392513.1_APIME Harpegnathos saltator Hsal_14793--XP_392513.1_APIME I 0.000
HMEL006570 Heliconius melpomene HMEL006570 I 0.000
JDP2 Homo sapiens ENSG00000140044 D 0.000
ATF3 Homo sapiens ENSG00000162772 D 0.000
ENSSTOG00000007121 Ictidomys tridecemlineatus ENSSTOG00000007121 I 0.000
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.000
ISCW023105 Ixodes scapularis ISCW023105 I 0.000
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I 0.000
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I 0.000
ENSLOCG00000000814 Lepisosteus oculatus ENSLOCG00000000814 I 0.000
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I 0.000
LDEC018714 Leptinotarsa decemlineata LDEC018714 I 0.000
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.000
ATF3 Loxodonta africana ENSLAFG00000032487 I 0.000
LCUP009590 Lucilia cuprina LCUP009590 I 0.000
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.000
ENSP00000355954 Macaca fascicularis ENSP00000355954 I 0.000
ATF3 Macaca mulatta ENSMMUG00000012185 I 0.000
ENSMEUG00000007708 Macropus eugenii ENSMEUG00000007708 I 0.000
ENSMEUG00000010422 Macropus eugenii ENSMEUG00000010422 I 0.000
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.000
ATF3 Meleagris gallopavo ENSMGAG00000009708 I 0.000
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.000
MCINX010628 Melitaea cinxia MCINX010628 I 0.000
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I 0.000
ATF3 Monodelphis domestica ENSMODG00000003042 I 0.000
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.000
MDOA009377 Musca domestica MDOA009377 I 0.000
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.000
ENSMPUG00000015864 Mustela putorius furo ENSMPUG00000015864 I 0.000
Atf3 Mus musculus ENSMUSG00000026628 D 0.000
Jdp2 Mus musculus ENSMUSG00000034271 D 0.000
Myotis_brandtii_Atf3_10018256 Myotis brandtii Myotis_brandtii_Atf3_10018256 I 0.000
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.000
Myotis_brandtii_ZNF570_10005459 Myotis brandtii Myotis_brandtii_ZNF570_10005459 I 0.000
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.000
ATF3 Myotis lucifugus ENSMLUG00000015048 I 0.000
ENSMLUG00000026078 Myotis lucifugus ENSMLUG00000026078 I 0.000
ENSMLUG00000026577 Myotis lucifugus ENSMLUG00000026577 I 0.000
NV16727 Nasonia vitripennis NV16727 I 0.000
ENSNLEG00000002916 Nomascus leucogenys ENSNLEG00000002916 I 0.000
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.000
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.000
ATF3 Ochotona princeps ENSOPRG00000013252 I 0.000
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.000
Ogr11165 Ophisaurus gracilis Ogr11165 I 0.000
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I 0.000
ENSONIG00000018687 Oreochromis niloticus ENSONIG00000018687 I 0.000
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I 0.000
ATF3 Ornithorhynchus anatinus ENSOANG00000008502 I 0.000
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.000
ATF3 Oryctolagus cuniculus ENSOCUG00000017424 I 0.000
jdp2a Oryzias latipes ENSORLG00000016515 I 0.000
jdp2b Oryzias latipes ENSORLG00000017506 I 0.000
atf3 Oryzias latipes ENSORLG00000019980 I 0.000
ATF3 Otolemur garnettii ENSOGAG00000005803 I 0.000
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.000
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.000
ENSOARG00000010493 Ovis aries ENSOARG00000010493 I 0.000
ATF3 Pan troglodytes ENSPTRG00000001962 I 0.000
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.000
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.000
ENSPANG00000021687 Papio anubis ENSPANG00000021687 I 0.000
PHUM288370 Pediculus humanus PHUM288370 I 0.000
ENSPSIG00000017647 Pelodiscus sinensis ENSPSIG00000017647 I 0.000
ENSPSIG00000017967 Pelodiscus sinensis ENSPSIG00000017967 I 0.000
ENSPMAG00000000427 Petromyzon marinus ENSPMAG00000000427 I 0.000
ENSPMAG00000006157 Petromyzon marinus ENSPMAG00000006157 I 0.000
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I 0.000
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I 0.000
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I 0.000
ENSPFOG00000017099 Poecilia formosa ENSPFOG00000017099 I 0.000
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.000
Pvit_13387 Pogona vitticeps Pvit_13387 I 0.000
ENSPPYG00000000235 Pongo abelii ENSPPYG00000000235 I 0.000
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.000
ATF3 Procavia capensis ENSPCAG00000000178 I 0.000
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.000
Atf3 Rattus norvegicus ENSRNOG00000003745 I 0.000
Jdp2 Rattus norvegicus ENSRNOG00000008224 D 0.000
RPRC001561 Rhodnius prolixus RPRC001561 I 0.000
ENSSHAG00000002406 Sarcophilus harrisii ENSSHAG00000002406 I 0.000
ENSSHAG00000010413 Sarcophilus harrisii ENSSHAG00000010413 I 0.000
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.000
SINV20083 Solenopsis invicta SINV20083 I 0.000
ATF3 Sus scrofa ENSSSCG00000015595 I 0.000
ATF3 Taeniopygia guttata ENSTGUG00000003050 I 0.000
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.000
jdp2b Takifugu rubripes ENSTRUG00000010344 I 0.000
atf3 Takifugu rubripes ENSTRUG00000015975 I 0.000
jdp2a Takifugu rubripes ENSTRUG00000018323 I 0.000
ENSTSYG00000010193 Tarsius syrichta ENSTSYG00000010193 I 0.000
tetur01g16110 Tetranychus urticae tetur01g16110 I 0.000
tetur01g16120 Tetranychus urticae tetur01g16120 I 0.000
atf3 Tetraodon nigroviridis ENSTNIG00000002524 I 0.000
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I 0.000
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I 0.000
TC008201 Tribolium castaneum TC008201 I 0.000
ATF3 Tupaia belangeri ENSTBEG00000002717 I 0.000
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.000
ATF3 Tursiops truncatus ENSTTRG00000013897 I 0.000
Tal_R002996 Tyto alba Tal_R002996 I 0.000
Tal_R007524 Tyto alba Tal_R007524 I 0.000
ENSVPAG00000003090 Vicugna pacos ENSVPAG00000003090 I 0.000
ATF3 Vicugna pacos ENSVPAG00000011563 I 0.000
atf3.L Xenopus laevis XB-GENE-6085256 I 0.000
atf3 Xenopus tropicalis XB-GENE-6085251 I 0.000
fosl1 Xenopus tropicalis XB-GENE-6257957 I 0.000
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I 0.000
ENSXMAG00000004443 Xiphophorus maculatus ENSXMAG00000004443 I 0.000
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I 0.000
L798_12793 Zootermopsis nevadensis L798_12793 I 0.000