Alligator_sinensis_CCG018614.2 (Alligator sinensis)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 Alligator_sinensis_CCG018614.2 T322124_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gmeb2
M00824_2.00 		Mus musculus
NNACGYNN
NNRCGTNN		 PBM
Weirauch et al.(2013)
pTH3084 		0.990 0.947
GMEB2
M03471_2.00 		Homo sapiens
YBACGYAM
KTRCGTVR		 SELEX
Jolma et al.(2013)
GMEB2_1 		0.990 0.947
GMEB2
M03472_2.00 		Homo sapiens
WACGTGSTYACGYW
WRCGTRASCACGTW		 SELEX
Jolma et al.(2013)
GMEB2_2 		0.990 0.947
GMEB2
M03473_2.00 		Homo sapiens
YACGTAACBBACGYA
TRCGTVVGTTACGTR		 SELEX
Jolma et al.(2013)
GMEB2_3 		0.990 0.947
GMEB2
M03474_2.00 		Homo sapiens
BKACGTAM
KTACGTMV		 SELEX
Jolma et al.(2013)
GMEB2_4 		0.990 0.947
GMEB2
M05735_2.00 		Homo sapiens
BYACGTAVSBTACGTRV
BYACGTAVSBTACGTRV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX 		0.990 0.947
GMEB2
M05736_2.00 		Homo sapiens
BBACGYAMVBNACGYVV
BBRCGTNVBKTRCGTVV		 SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX 		0.990 0.947
GMEB2
M02458_2.00 		Anolis carolinensis
NNACGYANN
NNTRCGTNN		 PBM
Weirauch et al.(2014)
pTH9219 		0.990 0.960
GMEB2
M02462_2.00 		Meleagris gallopavo
BBACGYH
DRCGTVV		 PBM
Weirauch et al.(2014)
pTH9211 		0.990 0.947
GMEB1
M02461_2.00 		Meleagris gallopavo
NNACGYNNN
NNNRCGTNN		 PBM
Weirauch et al.(2014)
pTH8318 		0.984 0.773
ENSMODG00000010947
M02463_2.00 		Monodelphis domestica
NNRCGYN
NRCGYNN		 PBM
Weirauch et al.(2014)
pTH8671 		0.984 0.773
GMEB1
M02460_2.00 		Homo sapiens
NNVCGYNNN
NNNRCGBNN		 PBM
Weirauch et al.(2014)
pTH9026 		0.984 0.760
Gmeb1
M00190_2.00 		Mus musculus
NNRCGYNNN
NNNRCGYNN		 PBM
Badis et al.(2009)
Gmeb1_1745 		0.984 0.760
GMEB1
M02465_2.00 		Pteropus vampyrus
NBACGYHN
NDRCGTVN		 PBM
Weirauch et al.(2014)
pTH9282 		0.984 0.760
GMEB1
M05737_2.00 		Homo sapiens
KKACGTAMNKTACGTAM
KTACGTAMNKTACGTMM		 SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX 		0.984 0.760
GMEB1
M05738_2.00 		Homo sapiens
KNRCGTVRBBVCGYHN
NDRCGBVVYBACGYNM		 SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX 		0.984 0.760
gmeb1.S
M02469_2.00 		Xenopus laevis
NKACGTVY
RBACGTMN		 PBM
Weirauch et al.(2014)
pTH9298 		0.979 0.733
gmeb1
M02468_2.00 		Xenopus tropicalis
NNRCGYNNN
NNNRCGYNN		 PBM
Weirauch et al.(2014)
pTH8745 		0.979 0.720
ENSCING00000003435
M02459_2.00 		Ciona intestinalis
NKACGTMVNN
NNBKACGTMN		 PBM
Weirauch et al.(2014)
pTH9356 		0.950 0.640
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG018614.2 SAND 344 419

Links

Other SAND family TFs
Other Alligator sinensis TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.990
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.984
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.984
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.984
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.990
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.985
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.990
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.984
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.990
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I 0.976
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.952
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.946
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.990
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.984
GMEB1 Bos taurus ENSBTAG00000001160 I 0.984
GMEB2 Bos taurus ENSBTAG00000014769 I 0.990
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.991
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.984
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.984
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.990
Aan_R005833 Calypte anna Aan_R005833 I 0.985
Aan_R015716 Calypte anna Aan_R015716 I 0.991
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.984
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.990
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.984
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.990
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.992
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.984
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.984
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.990
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.950
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.950
gmeb1 Danio rerio ENSDARG00000062060 I 0.934
GMEB2 Danio rerio ENSDARG00000093240 I 0.973
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.984
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.990
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.971
GMEB1 Equus caballus ENSECAG00000009764 I 0.984
GMEB2 Equus caballus ENSECAG00000019377 I 0.990
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I 0.979
GMEB1 Felis catus ENSFCAG00000018209 I 0.984
GMEB2 Felis catus ENSFCAG00000031273 I 0.990
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.984
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.991
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.961
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.905
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.945
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.984
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.990
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.963
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I 0.919
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.991
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.984
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.990
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.984
GMEB2 Homo sapiens ENSG00000101216 D 0.990
GMEB1 Homo sapiens ENSG00000162419 D 0.984
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.990
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.979
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.983
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.988
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.973
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.984
GMEB2 Loxodonta africana ENSLAFG00000012335 I 0.988
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I 0.979
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.984
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.990
GMEB1 Macaca mulatta ENSMMUG00000011390 I 0.875
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.984
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.980
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.984
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D 0.990
GMEB2 Microcebus murinus ENSMICG00000010614 I 0.979
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.984
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.991
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.990
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.984
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.984
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.990
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.984
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.990
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.984
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.990
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.984
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.990
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.984
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.985
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.932
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.971
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.989
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.984
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.984
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.990
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.941
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.963
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.990
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.984
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.990
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.984
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.990
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.984
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.990
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.992
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.985
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.949
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.943
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.972
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.990
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.984
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.984
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.990
GMEB2 Procavia capensis ENSPCAG00000000522 I 0.979
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.990
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.984
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.984
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.990
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.984
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.991
GMEB1 Sorex araneus ENSSARG00000001145 I 0.984
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.984
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.991
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.932
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.958
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.949
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.971
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.967
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.932
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.923
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.948
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.984
Tal_R007596 Tyto alba Tal_R007596 I 0.991
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.984
AAH84751 Xenopus laevis AAH84751 I 0.988
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.979
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.987
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.979
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.974
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.972
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.943