Aquca_014_00805 (Aquilegia coerulea)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Aquca_014_00805 T324144_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_014_00805.1 Sigma 70 206 276

Links

Other Sigma 70 family TFs
Other Aquilegia coerulea TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00248060 Amborella trichopoda AMTR_s00025p00248060 N 0.775
SIG4 Arabidopsis lyrata scaffold_601382.1 N 0.750
SIGD Arabidopsis thaliana AT5G13730 N 0.845
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.845
Bo9g166510 Brassica oleracea Bo9g166510 N 0.845
Bo2g011520 Brassica oleracea Bo2g011520 N 0.845
Bra008807 Brassica rapa Bra008807 N 0.845
Bra023430 Brassica rapa Bra023430 N 0.845
PK06863.1 Cannabis sativa PK06863.1 N 0.775
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.845
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.845
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.817
Ca_22857 Cicer arietinum Ca_22857 N 0.718
Cla017559 Citrullus lanatus Cla017559 N 0.704
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.831
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.845
Cucsa.248920 Cucumis sativus Cucsa.248920 N 0.718
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.845
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.817
LjSGA_045184.1 Lotus japonicus LjSGA_045184.1 N 0.732
MDP0000266956 Malus domestica MDP0000266956 N 0.704
MDP0000235160 Malus domestica MDP0000235160 N 0.718
cassava43094.valid.m1 Manihot esculenta cassava43094.valid.m1 N 0.775
MTR_3g033420 Medicago truncatula MTR_3g033420 N 0.732
mgf003626m Mimulus guttatus mgf003626m N 0.761
GSMUA_Achr4G18530_001 Musa acuminata GSMUA_Achr4G18530_001 N 0.775
PDK_20s1385451g001 Phoenix dactylifera PDK_20s1385451g001 N 0.803
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.789
Pm016510 Prunus mume Pm016510 N 0.775
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.775
29864.m001444 Ricinus communis 29864.m001444 N 0.729
SapurV1A.0027s0740 Salix purpurea SapurV1A.0027s0740 N 0.789
SapurV1A.4644s0020 Salix purpurea SapurV1A.4644s0020 N 0.789
Solyc01g087690.1 Solanum lycopersicum Solyc01g087690.1 N 0.817
PGSC0003DMG402006783 Solanum tuberosum PGSC0003DMG402006783 N 0.817
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.829