Ogr07750 (Ophisaurus gracilis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Ogr07750 T325335_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.771 0.771
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.771 0.771
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.771 0.771
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.771 0.771
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.771 0.771
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.771 0.771
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.771 0.771
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr07750 SMAD 31 78

Links

Other SMAD family TFs
Other Ophisaurus gracilis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_09759 Ancylostoma duodenale ANCDUO_09759 I
AALB000327 Anopheles albimanus AALB000327 I
AARA005138 Anopheles arabiensis AARA005138 I
ACHR004287 Anopheles christyi ACHR004287 I
ADIR006768 Anopheles dirus ADIR006768 I
AEPI004828 Anopheles epiroticus AEPI004828 I
AFUN001295 Anopheles funestus AFUN001295 I
AMAM009154 Anopheles maculatus AMAM009154 I
AMEC016887 Anopheles melas AMEC016887 I
AMIN006279 Anopheles minimus AMIN006279 I
AQUA000678 Anopheles quadriannulatus AQUA000678 I
GB40331 Apis mellifera GB40331 I
GB42226 Apis mellifera GB42226 I
ACEP26487 Atta cephalotes ACEP26487 I
BGLB001705 Biomphalaria glabrata BGLB001705 I
BGLB005976 Biomphalaria glabrata BGLB005976 I
e_gw.814.10.1 Branchiostoma floridae e_gw.814.10.1 I
ENSCING00000013809 Ciona intestinalis ENSCING00000013809 I
CGOC_0000387301 Cylicostephanus goldi CGOC_0000387301 I
Hmbox1 Dipodomys ordii ENSDORG00000015971 N
HMBOX1 Homo sapiens ENSG00000147421 D
HNF1A Homo sapiens ENSG00000135100 D
ISCW005275 Ixodes scapularis ISCW005275 I
ISCW017713 Ixodes scapularis ISCW017713 I
LDEC010767 Leptinotarsa decemlineata LDEC010767 I
ENSMEUG00000002781 Macropus eugenii ENSMEUG00000002781 I
maker-nMf.1.1.scaf05852-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf05852-augustus-gene-0.4 I
genemark-nMf.1.1.scaf05885-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf05885-processed-gene-0.2 I
MhA1_Contig1070.frz3.gene23 Meloidogyne hapla MhA1_Contig1070.frz3.gene23 I
HMBOX1 Microcebus murinus ENSMICG00000010422 N
ENSMICG00000004221 Microcebus murinus ENSMICG00000004221 I
Crx Mus musculus ENSMUSG00000041578 D
Hnf1a Mus musculus ENSMUSG00000029556 D
Hmbox1 Mus musculus ENSMUSG00000021972 D
HMBOX1 Ochotona princeps ENSOPRG00000013613 N
Ogr07758 Ophisaurus gracilis Ogr07758 N
PXEA_0000709901 Protopolystoma xenopodis PXEA_0000709901 I
SROB_0000568701 Schistosoma rodhaini SROB_0000568701 I
SINV23302 Solenopsis invicta SINV23302 I
HMBOX1 Sorex araneus ENSSARG00000009365 N
L893_g29073 Steinernema glaseri L893_g29073 I
SPU_008196 Strongylocentrotus purpuratus SPU_008196 N
SVUK_0000982701 Strongylus vulgaris SVUK_0000982701 I
EFV59137 Trichinella spiralis EFV59137 N
D918_03762 Trichuris suis D918_03762 N
TTRE_0000607501 Trichuris trichiura TTRE_0000607501 N