CBG19501 (Caenorhabditis briggsae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 CBG19501 T326875_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19501 Sox 30 95
CBG19501 Sox 124 192

Links

Other Sox family TFs
Other Caenorhabditis briggsae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N
PK29811.1 Cannabis sativa PK29811.1 N
MLOC_11838 Hordeum vulgare MLOC_11838 N
LPERR07G17900 Leersia perrieri LPERR07G17900 N
OBART03G22820 Oryza barthii OBART03G22820 N
OBART07G20600 Oryza barthii OBART07G20600 N
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N
BGIOSGA026049 Oryza indica BGIOSGA026049 N
BGIOSGA010454 Oryza indica BGIOSGA010454 N
OLONG_015384 Oryza longistaminata OLONG_015384 N
OMERI03G20600 Oryza meridionalis OMERI03G20600 N
OMERI07G17270 Oryza meridionalis OMERI07G17270 N
ONIVA07G19050 Oryza nivara ONIVA07G19050 N
ONIVA03G24370 Oryza nivara ONIVA03G24370 N
OPUNC07G19440 Oryza punctata OPUNC07G19440 N
OPUNC03G21330 Oryza punctata OPUNC03G21330 N
OPUNC07G19460 Oryza punctata OPUNC07G19460 N
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N
OS03G0445700 Oryza sativa OS03G0445700 N
OS07G0589000 Oryza sativa OS07G0589000 N
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N
Si031011m.g Setaria italica Si031011m.g N
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N
Traes_2DS_DE2E9E2D5 Triticum aestivum Traes_2DS_DE2E9E2D5 N
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N
GRMZM2G044902 Zea mays GRMZM2G044902 N
GRMZM2G177110 Zea mays GRMZM2G177110 N