Si031011m.g (Setaria italica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Si031011m.g T246055_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Si031011m LOB 15 117

Links

Other LOB family TFs
Other Setaria italica TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 1.000
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.980
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.949
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.939
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.939
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.939
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.929
OBART07G20600 Oryza barthii OBART07G20600 N 0.929
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.929
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.929
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.929
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.929
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.929
OS07G0589000 Oryza sativa OS07G0589000 N 0.929
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.918
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.918
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.908
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.898
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.888
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.887
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.878
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.878
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.867
OBART03G22820 Oryza barthii OBART03G22820 N 0.867
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.867
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.867
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.867
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.867
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.867
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.867
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.867
OS03G0445700 Oryza sativa OS03G0445700 N 0.867
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.867
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.857
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.857
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.857
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.857
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.847
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.847
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.847
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.847
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.847
OB03G31560 Oryza brachyantha OB03G31560 N 0.847
TCM_000766 Theobroma cacao TCM_000766 N 0.847
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.847
29661.m000902 Ricinus communis 29661.m000902 N 0.847
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.847
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.847
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.847
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.847
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.847
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.847
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.845
Bo1g003550 Brassica oleracea Bo1g003550 N 0.837
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.837
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.837
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.837
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.837
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.837
Cla014228 Citrullus lanatus Cla014228 N 0.837
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.837
PK03075.1 Cannabis sativa PK03075.1 N 0.837
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.837
LBD38 Arabidopsis thaliana AT3G49940 N 0.827
Bo7g099150 Brassica oleracea Bo7g099150 N 0.827
Bo7g118580 Brassica oleracea Bo7g118580 N 0.827
Bo8g079200 Brassica oleracea Bo8g079200 N 0.827
Bra011772 Brassica rapa Bra011772 N 0.827
Bra012913 Brassica rapa Bra012913 N 0.827
Bra031833 Brassica rapa Bra031833 N 0.827
Bra036040 Brassica rapa Bra036040 N 0.827
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.827
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.827
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.827
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.827
Ca_02208 Cicer arietinum Ca_02208 N 0.827
Ca_09342 Cicer arietinum Ca_09342 N 0.827
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.827
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.827
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.827
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.827
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.827
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.827
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.827
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.827
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.827
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.827
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.827
LBD39 Arabidopsis thaliana AT4G37540 N 0.816
Bo2g168020 Brassica oleracea Bo2g168020 N 0.816
Bo5g132850 Brassica oleracea Bo5g132850 N 0.816
Bo7g063630 Brassica oleracea Bo7g063630 N 0.816
Bo9g019150 Brassica oleracea Bo9g019150 N 0.816
Bra012164 Brassica rapa Bra012164 N 0.816
Bra037847 Brassica rapa Bra037847 N 0.816
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.816
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.816
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.816
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.816
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.816
mgf016064m Mimulus guttatus mgf016064m N 0.816
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.816
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.816
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.816
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.816
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.816
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.816
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.816
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.816
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.816
LBD37 Arabidopsis thaliana AT5G67420 N 0.806
Bra017831 Brassica rapa Bra017831 N 0.806
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.806
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.806
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.806
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.796
MDP0000151330 Malus domestica MDP0000151330 N 0.796
MDP0000239820 Malus domestica MDP0000239820 N 0.796
Bo9g018500 Brassica oleracea Bo9g018500 N 0.786
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.786
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.786
PK15647.1 Cannabis sativa PK15647.1 N 0.778
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.776
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.776
mgf007319m Mimulus guttatus mgf007319m N 0.776
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.765
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.765
Pm005389 Prunus mume Pm005389 N 0.765
Pm021281 Prunus mume Pm021281 N 0.765
30170.m013752 Ricinus communis 30170.m013752 N 0.765
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.765
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.765
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.765
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.755
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.755
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.755
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.755
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.755
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.755
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.755
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.755
PK03977.1 Cannabis sativa PK03977.1 N 0.755
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.745
OB03G33950 Oryza brachyantha OB03G33950 N 0.745
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.745
TCM_007211 Theobroma cacao TCM_007211 N 0.745
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.745
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.745
Cla020920 Citrullus lanatus Cla020920 N 0.745
28152.m000905 Ricinus communis 28152.m000905 N 0.745
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.745
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.745
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.745
MDP0000139025 Malus domestica MDP0000139025 N 0.745
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.745
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.745
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.745
GSMUA_Achr4G32550_001 Musa acuminata GSMUA_Achr4G32550_001 N 0.740
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.735
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.735
GSMUA_Achr2G13440_001 Musa acuminata GSMUA_Achr2G13440_001 N 0.735
OBART03G25820 Oryza barthii OBART03G25820 N 0.735
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.735
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.735
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.735
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.735
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.735
OS03G0609500 Oryza sativa OS03G0609500 N 0.735
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.735
Si037275m.g Setaria italica Si037275m.g N 0.735
TCM_034722 Theobroma cacao TCM_034722 N 0.735
Traes_4AL_7241716B6 Triticum aestivum Traes_4AL_7241716B6 N 0.735
TRIUR3_28321 Triticum urartu TRIUR3_28321 N 0.735
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.735
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.735
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.735
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.735
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.735
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N 0.732
BRADI1G14780 Brachypodium distachyon BRADI1G14780 N 0.724
F775_13634 Aegilops tauschii F775_13634 N 0.724
LPERR03G21440 Leersia perrieri LPERR03G21440 N 0.724
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.724
MDP0000487015 Malus domestica MDP0000487015 N 0.724
MDP0000747679 Malus domestica MDP0000747679 N 0.724
MDP0000794101 Malus domestica MDP0000794101 N 0.724
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.724
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.724
MLOC_51325 Hordeum vulgare MLOC_51325 N 0.717
Traes_4BS_3BCDF0612 Triticum aestivum Traes_4BS_3BCDF0612 N 0.717
Traes_4DS_9575221BB Triticum aestivum Traes_4DS_9575221BB N 0.717
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.714
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.714
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.714
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.714
mgf016023m Mimulus guttatus mgf016023m N 0.714
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.714
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.714
MDP0000247079 Malus domestica MDP0000247079 N 0.714
MDP0000261146 Malus domestica MDP0000261146 N 0.714
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.714
LBD40 Arabidopsis thaliana AT1G67100 N 0.704
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.704
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.704
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.704
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.704
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.704
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.704
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.704
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.704
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.704
Si022660m.g Setaria italica Si022660m.g N 0.704
TCM_019459 Theobroma cacao TCM_019459 N 0.704
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.704
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.704
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.704
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.704
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.704
MDP0000136037 Malus domestica MDP0000136037 N 0.704
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.704
Pavir.Ea00650 Panicum virgatum Pavir.Ea00650 N 0.704
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.704
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.704
PK03169.1 Cannabis sativa PK03169.1 N 0.704