CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G14780
(
Brachypodium distachyon
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
BRADI1G14780
T245096_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G14780.1
LOB
2
104
SCNGCRVLRKGCSDACVLRPSIEWIDGAQPQANATVFVAKFFGRAGLVASLAAVPLHHRPALFRSLLYEACGRTINPVSGGIGLMWTGNWDLCQAAADAVLRG
Links
Other
LOB
family TFs
Other
Brachypodium distachyon
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR03G21440
Leersia perrieri
LPERR03G21440
N
1.000
BGIOSGA010258
Oryza indica
BGIOSGA010258
N
0.990
GRMZM2G017319
Zea mays
GRMZM2G017319
N
0.990
OBART03G25820
Oryza barthii
OBART03G25820
N
0.990
OGLUM03G26640
Oryza glumaepatula
OGLUM03G26640
N
0.990
ONIVA03G26970
Oryza nivara
ONIVA03G26970
N
0.990
OPUNC03G23160
Oryza punctata
OPUNC03G23160
N
0.990
ORGLA03G0239300
Oryza glaberrima
ORGLA03G0239300
N
0.990
ORUFI03G26700
Oryza rufipogon
ORUFI03G26700
N
0.990
OS03G0609500
Oryza sativa
OS03G0609500
N
0.990
Si037275m.g
Setaria italica
Si037275m.g
N
0.990
Pavir.J16587
Panicum virgatum
Pavir.J16587
N
0.990
OB03G33950
Oryza brachyantha
OB03G33950
N
0.980
MLOC_51325
Hordeum vulgare
MLOC_51325
N
0.970
Traes_4BS_3BCDF0612
Triticum aestivum
Traes_4BS_3BCDF0612
N
0.970
Traes_4DS_9575221BB
Triticum aestivum
Traes_4DS_9575221BB
N
0.970
Traes_4AL_7241716B6
Triticum aestivum
Traes_4AL_7241716B6
N
0.969
TRIUR3_28321
Triticum urartu
TRIUR3_28321
N
0.969
GSMUA_Achr3G18860_001
Musa acuminata
GSMUA_Achr3G18860_001
N
0.765
BGIOSGA010454
Oryza indica
BGIOSGA010454
N
0.745
GRMZM2G044902
Zea mays
GRMZM2G044902
N
0.745
GSMUA_Achr2G13440_001
Musa acuminata
GSMUA_Achr2G13440_001
N
0.745
LPERR03G19360
Leersia perrieri
LPERR03G19360
N
0.745
OB03G31560
Oryza brachyantha
OB03G31560
N
0.745
OBART03G22820
Oryza barthii
OBART03G22820
N
0.745
OGLUM03G23580
Oryza glumaepatula
OGLUM03G23580
N
0.745
OLONG_015384
Oryza longistaminata
OLONG_015384
N
0.745
OMERI03G20600
Oryza meridionalis
OMERI03G20600
N
0.745
ONIVA03G24370
Oryza nivara
ONIVA03G24370
N
0.745
OPUNC03G21330
Oryza punctata
OPUNC03G21330
N
0.745
ORGLA03G0213800
Oryza glaberrima
ORGLA03G0213800
N
0.745
ORUFI03G23490
Oryza rufipogon
ORUFI03G23490
N
0.745
OS03G0445700
Oryza sativa
OS03G0445700
N
0.745
Sb01g031790
Sorghum bicolor
Sb01g031790
N
0.742
GSMUA_Achr7G26260_001
Musa acuminata
GSMUA_Achr7G26260_001
N
0.735
SELMODRAFT_37566
Selaginella moellendorffii
SELMODRAFT_37566
N
0.735
SELMODRAFT_37570
Selaginella moellendorffii
SELMODRAFT_37570
N
0.735
Pavir.J18418
Panicum virgatum
Pavir.J18418
N
0.735
PK15647.1
Cannabis sativa
PK15647.1
N
0.728
LBD37
Arabidopsis thaliana
AT5G67420
N
0.724
Bo2g168020
Brassica oleracea
Bo2g168020
N
0.724
Bo5g132850
Brassica oleracea
Bo5g132850
N
0.724
Bo7g063630
Brassica oleracea
Bo7g063630
N
0.724
Bo9g019150
Brassica oleracea
Bo9g019150
N
0.724
Bra012164
Brassica rapa
Bra012164
N
0.724
Bra031833
Brassica rapa
Bra031833
N
0.724
Bra037847
Brassica rapa
Bra037847
N
0.724
LBD37
Arabidopsis lyrata
fgenesh2_kg.8__2670__AT5G67420.1
N
0.724
GSMUA_Achr3G30130_001
Musa acuminata
GSMUA_Achr3G30130_001
N
0.724
GSMUA_Achr4G14150_001
Musa acuminata
GSMUA_Achr4G14150_001
N
0.724
Sb02g038030
Sorghum bicolor
Sb02g038030
N
0.724
Si031011m.g
Setaria italica
Si031011m.g
N
0.724
Bostr.0568s0168
Boechera stricta
Bostr.0568s0168
N
0.724
Cagra.0342s0030
Capsella grandiflora
Cagra.0342s0030
N
0.724
Carubv10027507m.g
Capsella rubella
Carubv10027507m.g
N
0.724
Pavir.Bb01170
Panicum virgatum
Pavir.Bb01170
N
0.724
Pavir.Ia03080
Panicum virgatum
Pavir.Ia03080
N
0.724
Thhalv10004811m.g
Eutrema salsugineum
Thhalv10004811m.g
N
0.724
BRADI1G22920
Brachypodium distachyon
BRADI1G22920
N
0.714
GRMZM2G177110
Zea mays
GRMZM2G177110
N
0.714
VIT_07s0129g00330
Vitis vinifera
VIT_07s0129g00330
N
0.714
Ciclev10029274m.g
Citrus clementina
Ciclev10029274m.g
N
0.714
Pavir.Ba01055
Panicum virgatum
Pavir.Ba01055
N
0.714
GSMUA_Achr4G32550_001
Musa acuminata
GSMUA_Achr4G32550_001
N
0.708
LBD38
Arabidopsis thaliana
AT3G49940
N
0.704
Bo7g099150
Brassica oleracea
Bo7g099150
N
0.704
Bo8g079200
Brassica oleracea
Bo8g079200
N
0.704
Bra012913
Brassica rapa
Bra012913
N
0.704
Bra036040
Brassica rapa
Bra036040
N
0.704
GLYMA05G22120
Glycine max
GLYMA05G22120
N
0.704
GSMUA_Achr6G07770_001
Musa acuminata
GSMUA_Achr6G07770_001
N
0.704
PGSC0003DMG400024936
Solanum tuberosum
PGSC0003DMG400024936
N
0.704
POPTR_0001s30280
Populus trichocarpa
POPTR_0001s30280
N
0.704
LBD38
Arabidopsis lyrata
scaffold_502015.1
N
0.704
Solyc02g092550.2
Solanum lycopersicum
Solyc02g092550.2
N
0.704
Traes_2AS_942884399
Triticum aestivum
Traes_2AS_942884399
N
0.704
Cla014228
Citrullus lanatus
Cla014228
N
0.704
e_gw1.19.226.1
Physcomitrella patens
e_gw1.19.226.1
N
0.704
Cagra.4491s0014
Capsella grandiflora
Cagra.4491s0014
N
0.704
Carubv10017944m.g
Capsella rubella
Carubv10017944m.g
N
0.704
Ciclev10026374m.g
Citrus clementina
Ciclev10026374m.g
N
0.704
Eucgr.G02321
Eucalyptus grandis
Eucgr.G02321
N
0.704
orange1.1g026365m.g
Citrus sinensis
orange1.1g026365m.g
N
0.704