CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4AL_7241716B6
(
Triticum aestivum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Traes_4AL_7241716B6
T246177_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4AL_7241716B6.1
LOB
2
105
SCNGCRVLRKGCSDACVLRPSIEWIDGAQPQANATVFVAKFFGRAGLVASLAAVPLHHRPALFRSLLYEACGRTINPVSGAIGLMWTSNWDLCQAAAEAVLRGD
Links
Other
LOB
family TFs
Other
Triticum aestivum
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIUR3_28321
Triticum urartu
TRIUR3_28321
N
1.000
MLOC_51325
Hordeum vulgare
MLOC_51325
N
0.990
Traes_4BS_3BCDF0612
Triticum aestivum
Traes_4BS_3BCDF0612
N
0.990
Traes_4DS_9575221BB
Triticum aestivum
Traes_4DS_9575221BB
N
0.990
BGIOSGA010258
Oryza indica
BGIOSGA010258
N
0.970
GRMZM2G017319
Zea mays
GRMZM2G017319
N
0.970
OBART03G25820
Oryza barthii
OBART03G25820
N
0.970
OGLUM03G26640
Oryza glumaepatula
OGLUM03G26640
N
0.970
ONIVA03G26970
Oryza nivara
ONIVA03G26970
N
0.970
OPUNC03G23160
Oryza punctata
OPUNC03G23160
N
0.970
ORGLA03G0239300
Oryza glaberrima
ORGLA03G0239300
N
0.970
ORUFI03G26700
Oryza rufipogon
ORUFI03G26700
N
0.970
OS03G0609500
Oryza sativa
OS03G0609500
N
0.970
Si037275m.g
Setaria italica
Si037275m.g
N
0.970
Pavir.J16587
Panicum virgatum
Pavir.J16587
N
0.970
BRADI1G14780
Brachypodium distachyon
BRADI1G14780
N
0.969
LPERR03G21440
Leersia perrieri
LPERR03G21440
N
0.969
OB03G33950
Oryza brachyantha
OB03G33950
N
0.960
GSMUA_Achr3G18860_001
Musa acuminata
GSMUA_Achr3G18860_001
N
0.755
LPERR03G19360
Leersia perrieri
LPERR03G19360
N
0.755
OGLUM03G23580
Oryza glumaepatula
OGLUM03G23580
N
0.755
BGIOSGA010454
Oryza indica
BGIOSGA010454
N
0.747
OBART03G22820
Oryza barthii
OBART03G22820
N
0.747
OLONG_015384
Oryza longistaminata
OLONG_015384
N
0.747
OMERI03G20600
Oryza meridionalis
OMERI03G20600
N
0.747
ONIVA03G24370
Oryza nivara
ONIVA03G24370
N
0.747
OPUNC03G21330
Oryza punctata
OPUNC03G21330
N
0.747
ORGLA03G0213800
Oryza glaberrima
ORGLA03G0213800
N
0.747
ORUFI03G23490
Oryza rufipogon
ORUFI03G23490
N
0.747
OS03G0445700
Oryza sativa
OS03G0445700
N
0.747
GSMUA_Achr7G26260_001
Musa acuminata
GSMUA_Achr7G26260_001
N
0.745
PK15647.1
Cannabis sativa
PK15647.1
N
0.741
PK25954.1
Cannabis sativa
PK25954.1
N
0.739
LBD37
Arabidopsis thaliana
AT5G67420
N
0.735
Bo5g132850
Brassica oleracea
Bo5g132850
N
0.735
Bo9g019150
Brassica oleracea
Bo9g019150
N
0.735
GSMUA_Achr3G30130_001
Musa acuminata
GSMUA_Achr3G30130_001
N
0.735
OB03G31560
Oryza brachyantha
OB03G31560
N
0.735
Sb02g038030
Sorghum bicolor
Sb02g038030
N
0.735
Si031011m.g
Setaria italica
Si031011m.g
N
0.735
Pavir.Bb01170
Panicum virgatum
Pavir.Bb01170
N
0.735
Sb01g031790
Sorghum bicolor
Sb01g031790
N
0.732
Bo2g168020
Brassica oleracea
Bo2g168020
N
0.727
Bo7g063630
Brassica oleracea
Bo7g063630
N
0.727
Bra012164
Brassica rapa
Bra012164
N
0.727
Bra031833
Brassica rapa
Bra031833
N
0.727
Bra037847
Brassica rapa
Bra037847
N
0.727
LBD37
Arabidopsis lyrata
fgenesh2_kg.8__2670__AT5G67420.1
N
0.727
GRMZM2G044902
Zea mays
GRMZM2G044902
N
0.727
GSMUA_Achr2G13440_001
Musa acuminata
GSMUA_Achr2G13440_001
N
0.727
GSMUA_Achr4G14150_001
Musa acuminata
GSMUA_Achr4G14150_001
N
0.727
Bostr.0568s0168
Boechera stricta
Bostr.0568s0168
N
0.727
Cagra.0342s0030
Capsella grandiflora
Cagra.0342s0030
N
0.727
Carubv10027507m.g
Capsella rubella
Carubv10027507m.g
N
0.727
Thhalv10004811m.g
Eutrema salsugineum
Thhalv10004811m.g
N
0.727
Traes_4BL_D44ACD58E
Triticum aestivum
Traes_4BL_D44ACD58E
N
0.725
Pavir.Ba01055
Panicum virgatum
Pavir.Ba01055
N
0.724
Pavir.J18418
Panicum virgatum
Pavir.J18418
N
0.724
GRMZM2G177110
Zea mays
GRMZM2G177110
N
0.717
SELMODRAFT_37566
Selaginella moellendorffii
SELMODRAFT_37566
N
0.717
SELMODRAFT_37570
Selaginella moellendorffii
SELMODRAFT_37570
N
0.717
VIT_07s0129g00330
Vitis vinifera
VIT_07s0129g00330
N
0.717
Ciclev10029274m.g
Citrus clementina
Ciclev10029274m.g
N
0.717
LBD38
Arabidopsis thaliana
AT3G49940
N
0.714
BRADI1G22920
Brachypodium distachyon
BRADI1G22920
N
0.714
GLYMA05G22120
Glycine max
GLYMA05G22120
N
0.714
PGSC0003DMG400024936
Solanum tuberosum
PGSC0003DMG400024936
N
0.714
Solyc02g092550.2
Solanum lycopersicum
Solyc02g092550.2
N
0.714
MDP0000151330
Malus domestica
MDP0000151330
N
0.711
MDP0000239820
Malus domestica
MDP0000239820
N
0.711
GSMUA_Achr4G32550_001
Musa acuminata
GSMUA_Achr4G32550_001
N
0.708
Bo7g099150
Brassica oleracea
Bo7g099150
N
0.707
Bo8g079200
Brassica oleracea
Bo8g079200
N
0.707
Bra012913
Brassica rapa
Bra012913
N
0.707
Bra036040
Brassica rapa
Bra036040
N
0.707
LBD38
Arabidopsis lyrata
scaffold_502015.1
N
0.707
e_gw1.19.226.1
Physcomitrella patens
e_gw1.19.226.1
N
0.707
Cagra.4491s0014
Capsella grandiflora
Cagra.4491s0014
N
0.707
Carubv10017944m.g
Capsella rubella
Carubv10017944m.g
N
0.707
Ciclev10026374m.g
Citrus clementina
Ciclev10026374m.g
N
0.707
orange1.1g026365m.g
Citrus sinensis
orange1.1g026365m.g
N
0.707
Pavir.Ia03080
Panicum virgatum
Pavir.Ia03080
N
0.707
AMTR_s00137p00087340
Amborella trichopoda
AMTR_s00137p00087340
N
0.704
Bra011772
Brassica rapa
Bra011772
N
0.704
GLYMA17G17540
Glycine max
GLYMA17G17540
N
0.704
POPTR_0001s30280
Populus trichocarpa
POPTR_0001s30280
N
0.704
TCM_000766
Theobroma cacao
TCM_000766
N
0.704
29661.m000902
Ricinus communis
29661.m000902
N
0.704
cassava7497.valid.m1
Manihot esculenta
cassava7497.valid.m1
N
0.704
Bostr.6864s0247
Boechera stricta
Bostr.6864s0247
N
0.704
Bostr.7867s1612
Boechera stricta
Bostr.7867s1612
N
0.704
Thhalv10010666m.g
Eutrema salsugineum
Thhalv10010666m.g
N
0.704