PK29811.1 (Cannabis sativa)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 PK29811.1 T247403_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK29811.1 LOB 1 43

Links

Other LOB family TFs
Other Cannabis sativa TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.953
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.953
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.930
Ca_09342 Cicer arietinum Ca_09342 N 0.930
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.930
Bo8g079200 Brassica oleracea Bo8g079200 N 0.907
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.907
PRUPE_ppa010480mg Prunus persica PRUPE_ppa010480mg N 0.907
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.907
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.907
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.907
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.907
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.907
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.907
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.907
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.907
Bo9g018500 Brassica oleracea Bo9g018500 N 0.884
Bra017831 Brassica rapa Bra017831 N 0.884
Bra037847 Brassica rapa Bra037847 N 0.884
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.884
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.884
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.884
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.884
Cla014228 Citrullus lanatus Cla014228 N 0.884
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.884
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.884
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.884
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.872
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.860
Bo2g168020 Brassica oleracea Bo2g168020 N 0.860
Bra031833 Brassica rapa Bra031833 N 0.860
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.860
OBART03G22820 Oryza barthii OBART03G22820 N 0.860
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.860
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.860
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.860
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.860
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.860
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.860
OS03G0445700 Oryza sativa OS03G0445700 N 0.860
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.860
Pm005389 Prunus mume Pm005389 N 0.860
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.860
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.860
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.860
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.860
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.837
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.837
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.837
mgf007319m Mimulus guttatus mgf007319m N 0.837
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.837
Ciclev10029274m.g Citrus clementina Ciclev10029274m.g N 0.837
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.837
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.814
TCM_034722 Theobroma cacao TCM_034722 N 0.814
Cla020920 Citrullus lanatus Cla020920 N 0.814
Pm021281 Prunus mume Pm021281 N 0.814
MDP0000794101 Malus domestica MDP0000794101 N 0.814
F775_13634 Aegilops tauschii F775_13634 N 0.791
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.791
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.791
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.791
TCM_007211 Theobroma cacao TCM_007211 N 0.791
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.791
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.791
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.791
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.791
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.791
MDP0000139025 Malus domestica MDP0000139025 N 0.791
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.791
LPERR07G17900 Leersia perrieri LPERR07G17900 N 0.784
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.767
GSMUA_Achr6G07770_001 Musa acuminata GSMUA_Achr6G07770_001 N 0.767
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.767
OBART07G20600 Oryza barthii OBART07G20600 N 0.767
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.767
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.767
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.767
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.767
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.767
OS07G0589000 Oryza sativa OS07G0589000 N 0.767
Si022660m.g Setaria italica Si022660m.g N 0.767
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.767
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.744
TRAES3BF008500030CFD_g Triticum aestivum TRAES3BF008500030CFD_g N 0.744
TRAES3BF008600030CFD_g Triticum aestivum TRAES3BF008600030CFD_g N 0.744
28207.m000107 Ricinus communis 28207.m000107 N 0.744
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.744
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.744
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.721
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.721
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.721
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.721
GRMZM2G132693 Zea mays GRMZM2G132693 N 0.721
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.721
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.721
OBART03G25820 Oryza barthii OBART03G25820 N 0.721
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.721
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.721
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.721
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.721
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.721
OS03G0609500 Oryza sativa OS03G0609500 N 0.721
Si037275m.g Setaria italica Si037275m.g N 0.721
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.721
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.721
PK03169.1 Cannabis sativa PK03169.1 N 0.721