CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTTG_03070
(
Puccinia triticina
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PTTG_03070
T332242_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_03070P0
Sox
150
189
SSEGRPKCTYIARTVGDRWKTLDPSTKEAFEREASEQKIA
Links
Other
Sox
family TFs
Other
Puccinia triticina
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.scaffold_535000011
Branchiostoma floridae
fgenesh2_pg.scaffold_535000011
N
0.437
CBN19486
Caenorhabditis brenneri
CBN19486
N
0.419
CGOC_0001370301
Cylicostephanus goldi
CGOC_0001370301
N
0.427
DDB_G0287433
Dictyostelium discoideum
DDB_G0287433
N
0.418
GH17483
Drosophila grimshawi
FBgn0124953
N
0.446
EMIHUDRAFT_107556
Emiliania huxleyi
EMIHUDRAFT_107556
N
0.480
EMIHUDRAFT_468050
Emiliania huxleyi
EMIHUDRAFT_468050
N
0.455
Thhalv10015680m.g
Eutrema salsugineum
Thhalv10015680m.g
N
0.446
GPLIN_001054700
Globodera pallida
GPLIN_001054700
N
0.449
MELLADRAFT_86211
Melampsora laricipopulina
MELLADRAFT_86211
N
0.459
OLONG_013579
Oryza longistaminata
OLONG_013579
N
0.461
PPA22145
Pristionchus pacificus
PPA22145
N
0.446
GLOINDRAFT_16424
Rhizophagus irregularis
GLOINDRAFT_16424
N
0.416
Sakowv30045438m.g
Saccoglossus kowalevskii
Sakowv30045438m.g
N
0.419
SBAD_0001127201
Soboliphyme baturini
SBAD_0001127201
N
0.447
SPU_021871
Strongylocentrotus purpuratus
SPU_021871
N
0.485
TRAES3BF116200180CFD_g
Triticum aestivum
TRAES3BF116200180CFD_g
N
0.422
TcIL3000.10.440
Trypanosoma congolense
TcIL3000.10.440
N
0.430