SETTUDRAFT_174840 (Setosphaeria turcica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 SETTUDRAFT_174840 T332536_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mat1-Mc
M11340_2.00 		Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN		 Transfac
Matys et al.(2006)
F$MAT1MC_01 		0.537 0.406
mat1-Mc
M11341_2.00 		Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR		 Transfac
Matys et al.(2006)
F$MAT1MC_02 		0.537 0.406
ROX1
M00070_2.00 		Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN		 PBM
Badis et al.(2008)
ROX1_2099 		0.469 0.449
ROX1
M07498_2.00 		Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1 		0.469 0.449
ROX1
M08607_2.00 		Saccharomyces cerevisiae
BYATTGTN
NACAATRV		 Misc
DeBoer et al.(2011)
YPR065W_1396 		0.469 0.449
ROX1
M11346_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6_01 		0.469 0.449
ROX1
M11347_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ROX1_Q6 		0.469 0.449
ste11
M11342_2.00 		Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH		 Transfac
Matys et al.(2006)
F$STE11_01 		0.442 0.377
ste11
M11343_2.00 		Schizosaccharomyces pombe Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$STE11_02 		0.442 0.377
fmf-1
M02491_2.00 		Neurospora crassa
TCTTTGTY
RACAAAGA		 PBM
Weirauch et al.(2014)
pTH8941 		0.438 0.319
SOX15
M03508_2.00 		Homo sapiens
AACAATAMCATTGTT
AACAATGKTATTGTT		 SELEX
Jolma et al.(2013)
SOX15_1 		0.431 0.362
SOX15
M03509_2.00 		Homo sapiens
ATCAATAMCATTGAT
ATCAATGKTATTGAT		 SELEX
Jolma et al.(2013)
SOX15_2 		0.431 0.362
SOX15
M03510_2.00 		Homo sapiens
ATGAATAACATTCAT
ATGAATGTTATTCAT		 SELEX
Jolma et al.(2013)
SOX15_3 		0.431 0.362
SOX15
M05893_2.00 		Homo sapiens
YYWTTGTNHN
NDNACAAWRR		 SMiLE-seq
Isakova et al.(2017)
SOX15 		0.431 0.362
SOX15
M11308_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SOX15_Q3 		0.431 0.362
Sox15
M00202_2.00 		Mus musculus
WTTVWNNNN
NNNNWBAAW		 PBM
Badis et al.(2009)
Sox15_3457 		0.431 0.348
egl-13
M00710_2.00 		Caenorhabditis elegans
NNAACAATWN
NWATTGTTNN		 PBM
Narasimhan et al.(2015)
pTH9125 		0.424 0.362
Sox102F
M03981_2.00 		Drosophila melanogaster
ATTGTTCGGTGKN
NMCACCGAACAAT		 SELEX
Nitta et al.(2015)
Sox102F_1 		0.424 0.362
Sox102F
M03982_2.00 		Drosophila melanogaster
NAACAATDDCATTGTTN
NAACAATGHHATTGTTN		 SELEX
Nitta et al.(2015)
Sox102F_2 		0.424 0.362
SRY
M03525_2.00 		Homo sapiens
AACAATANCATTGTT
AACAATGNTATTGTT		 SELEX
Jolma et al.(2013)
SRY_1 		0.419 0.377
SRY
M03526_2.00 		Homo sapiens
AACAATHHNCATTGTT
AACAATGNDDATTGTT		 SELEX
Jolma et al.(2013)
SRY_2 		0.419 0.377
SRY
M03527_2.00 		Homo sapiens
TCAATAMCATTGA
TCAATGKTATTGA		 SELEX
Jolma et al.(2013)
SRY_3 		0.419 0.377
SRY
M03528_2.00 		Homo sapiens
TGAATANCATTCA
TGAATGNTATTCA		 SELEX
Jolma et al.(2013)
SRY_4 		0.419 0.377
SRY
M05898_2.00 		Homo sapiens
NACAATNV
BNATTGTN		 SMiLE-seq
Isakova et al.(2017)
SRY 		0.419 0.377
SRY
M02717_2.00 		Homo sapiens
NDWAACAAW
WTTGTWWHN		 SELEX
Mathelier et al.(2014)
MA0084.1 		0.419 0.377
SRY
M09398_2.00 		Homo sapiens
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_HUMAN.H11MO.0.B 		0.419 0.377
SRY
M11331_2.00 		Homo sapiens
AAWSWMM
KKWSWTT		 Transfac
Matys et al.(2006)
V$SRY_01 		0.419 0.377
SRY
M11332_2.00 		Homo sapiens
HBHWTTGTTWDN
NHWAACAAWDVD		 Transfac
Matys et al.(2006)
V$SRY_02 		0.419 0.377
SRY
M11333_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRY_Q6 		0.419 0.377
Sry
M00211_2.00 		Mus musculus
ATTRTNNNNN
NNNNNAYAAT		 PBM
Badis et al.(2009)
Sry_2833 		0.419 0.348
Sry
M09408_2.00 		Mus musculus
BWTTGTTWH
DWAACAAWV		 Misc
Kulakovskiy et al.(2013)
SRY_MOUSE.H11MO.0.B 		0.419 0.348
Sox30
M00201_2.00 		Mus musculus
ATTRTBNNNN
NNNNVAYAAT		 PBM
Badis et al.(2009)
Sox30_2781 		0.417 0.362
SOX30
M05753_2.00 		Homo sapiens
NRACAATN
NATTGTYN		 SELEX
Yin et al.(2017)
SOX30_eDBD_HT-SELEX 		0.417 0.362
SOX30
M05754_2.00 		Homo sapiens
BATTGTYN
NRACAATV		 SELEX
Yin et al.(2017)
SOX30_eDBD_Methyl-HT-SELEX 		0.417 0.362
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOA90658 Sox 504 572

Links

Other Sox family TFs
Other Setosphaeria turcica TFs

787 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01517 Acanthocheilonema viteae nAv.1.0.1.g01517 I
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I
ACAC_0001014401 Angiostrongylus cantonensis ACAC_0001014401 N
ACOC_0000988901 Angiostrongylus costaricensis ACOC_0000988901 N
ASIM_0001558001 Anisakis simplex ASIM_0001558001 I
ALUE_0000232801 Ascaris lumbricoides ALUE_0000232801 I
ASU_04180 Ascaris suum ASU_04180 I
Bm2663 Brugia malayi Bm2663 I
BTMF_0001276401 Brugia timori BTMF_0001276401 I
CBN10543 Caenorhabditis brenneri CBN10543 I
CBG17980 Caenorhabditis briggsae CBG17980 I
pal-1 Caenorhabditis elegans WBGene00003912 D
CJA02391 Caenorhabditis japonica CJA02391 I
CRE20227 Caenorhabditis remanei CRE20227 I
DICVIV_02748 Dictyocaulus viviparus DICVIV_02748 N
nDi.2.2.2.g06197 Dirofilaria immitis nDi.2.2.2.g06197 I
EEL_0000223001 Elaeophora elaphi EEL_0000223001 I
EVEC_0000579401 Enterobius vermicularis EVEC_0000579401 I
HCOI01745700 Haemonchus contortus HCOI01745700 I
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I
HPBE_0001563701 Heligmosomoides bakeri HPBE_0001563701 I
HelroG128744 Helobdella robusta HelroG128744 N
nLs.2.1.2.g09719 Litomosoides sigmodontis nLs.2.1.2.g09719 I
LOAG_15485 Loa loa LOAG_15485 I
maker-nMf.1.1.scaf03287-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03287-augustus-gene-0.5 N
ENSMODG00000025439 Monodelphis domestica ENSMODG00000025439 I
NECAME_06333 Necator americanus NECAME_06333 I
NBR_0000825001 Nippostrongylus brasiliensis NBR_0000825001 I
OESDEN_25610 Oesophagostomum dentatum OESDEN_25610 N
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I
OFLC_0000632501 Onchocerca flexuosa OFLC_0000632501 I
WBGene00246390 Onchocerca volvulus WBGene00246390 I
PEQ_0000241601 Parascaris equorum PEQ_0000241601 N
PTRK_0001336600 Parastrongyloides trichosuri PTRK_0001336600 I
scaffold1496-EXSNAP2012.4 Pristionchus exspectatus scaffold1496-EXSNAP2012.4 N
scaffold580-EXSNAP2012.2 Pristionchus exspectatus scaffold580-EXSNAP2012.2 N
RSKR_0001046900 Rhabditophanes kr3021 RSKR_0001046900 I
SPAL_0001492700 Strongyloides papillosus SPAL_0001492700 I
SSTP_0000576200 Strongyloides stercoralis SSTP_0000576200 I
SVE_0397300 Strongyloides venezuelensis SVE_0397300 I
SVUK_0001504901 Strongylus vulgaris SVUK_0001504901 I
SMUV_0000190101 Syphacia muris SMUV_0000190101 I
SMUV_0000918401 Syphacia muris SMUV_0000918401 I
TCLT_0000255601 Thelazia callipaeda TCLT_0000255601 I
TCNE_0000481301 Toxocara canis TCNE_0000481301 N
TCNE_0001280701 Toxocara canis TCNE_0001280701 I
EFV58119 Trichinella spiralis EFV58119 I
WUBG_02562 Wuchereria bancrofti WUBG_02562 I
cdx1 Xenopus tropicalis XB-GENE-485396 I